Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp1Q8BJQ2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Gm4459-201ENSMUST00000118750 468 ntBASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp1Q8BJQ2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp1Q8BJQ2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Usp1Q8BJQ2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp1Q8BJQ2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp1Q8BJQ2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp1Q8BJQ2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.02■□□□□ 0.31
Usp1Q8BJQ2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Gm8097-201ENSMUST00000117903 829 ntBASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Gm15173-201ENSMUST00000122049 433 ntBASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Usp1Q8BJQ2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Gm8655-201ENSMUST00000221159 852 ntBASIC17■□□□□ 0.31
Usp1Q8BJQ2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp1Q8BJQ2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Gm25406-201ENSMUST00000157599 105 ntBASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 AV026068-213ENSMUST00000223675 1171 ntBASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Psmb5-202ENSMUST00000227257 622 ntBASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp1Q8BJQ2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms