Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Gm45328-201ENSMUST00000210942 917 ntBASIC17.05■□□□□ 0.32
Syne3Q4FZC9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Syne3Q4FZC9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Gm33142-201ENSMUST00000193913 867 ntBASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syne3Q4FZC9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syne3Q4FZC9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Gm14859-201ENSMUST00000117752 357 ntBASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syne3Q4FZC9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syne3Q4FZC9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms