Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 AC005082.1-201ENST00000413042 2259 ntBASIC19.51■□□□□ 0.71
EIF3EP60228 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
EIF3EP60228 KRT8P11-201ENST00000409686 1436 ntBASIC19.51■□□□□ 0.71
EIF3EP60228 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.51■□□□□ 0.71
EIF3EP60228 AC090164.3-201ENST00000610780 2143 ntBASIC19.51■□□□□ 0.71
EIF3EP60228 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
EIF3EP60228 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.51■□□□□ 0.71
EIF3EP60228 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.51■□□□□ 0.71
EIF3EP60228 RPS2P4-201ENST00000476944 856 ntBASIC19.51■□□□□ 0.71
EIF3EP60228 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.51■□□□□ 0.71
EIF3EP60228 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.51■□□□□ 0.71
EIF3EP60228 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.51■□□□□ 0.71
EIF3EP60228 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
EIF3EP60228 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.51■□□□□ 0.71
EIF3EP60228 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3EP60228 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.51■□□□□ 0.71
EIF3EP60228 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.51■□□□□ 0.71
EIF3EP60228 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
EIF3EP60228 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
EIF3EP60228 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.5■□□□□ 0.71
EIF3EP60228 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
EIF3EP60228 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.5■□□□□ 0.71
EIF3EP60228 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
EIF3EP60228 AL353708.3-201ENST00000610272 989 ntBASIC19.5■□□□□ 0.71
EIF3EP60228 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.5■□□□□ 0.71
EIF3EP60228 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3EP60228 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.49■□□□□ 0.71
EIF3EP60228 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 KSR1P1-201ENST00000446298 240 ntBASIC19.49■□□□□ 0.71
EIF3EP60228 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
EIF3EP60228 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
EIF3EP60228 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.49■□□□□ 0.71
EIF3EP60228 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3EP60228 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
EIF3EP60228 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.49■□□□□ 0.71
EIF3EP60228 RCC2P6-201ENST00000526625 1557 ntBASIC19.49■□□□□ 0.71
EIF3EP60228 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.48■□□□□ 0.71
EIF3EP60228 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
EIF3EP60228 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
EIF3EP60228 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EIF3EP60228 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EIF3EP60228 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
EIF3EP60228 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EIF3EP60228 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
EIF3EP60228 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.48■□□□□ 0.71
EIF3EP60228 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.48■□□□□ 0.71
EIF3EP60228 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
EIF3EP60228 RPPH1-201ENST00000516869 333 ntBASIC19.48■□□□□ 0.71
EIF3EP60228 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.48■□□□□ 0.71
EIF3EP60228 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.48■□□□□ 0.71
EIF3EP60228 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.48■□□□□ 0.71
EIF3EP60228 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.48■□□□□ 0.71
EIF3EP60228 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.48■□□□□ 0.71
EIF3EP60228 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
EIF3EP60228 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EIF3EP60228 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EIF3EP60228 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
EIF3EP60228 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
EIF3EP60228 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.48■□□□□ 0.71
EIF3EP60228 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.48■□□□□ 0.71
EIF3EP60228 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.47■□□□□ 0.71
EIF3EP60228 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.47■□□□□ 0.71
EIF3EP60228 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EIF3EP60228 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.47■□□□□ 0.71
EIF3EP60228 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms