Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA4P43681 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA4P43681 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.07■□□□□ 0.64
CHRNA4P43681 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA4P43681 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
CHRNA4P43681 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.06■□□□□ 0.64
CHRNA4P43681 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.06■□□□□ 0.64
CHRNA4P43681 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.06■□□□□ 0.64
CHRNA4P43681 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CHRNA4P43681 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CHRNA4P43681 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CHRNA4P43681 AC079598.2-202ENST00000546624 1451 ntBASIC19.06■□□□□ 0.64
CHRNA4P43681 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.06■□□□□ 0.64
CHRNA4P43681 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CHRNA4P43681 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.06■□□□□ 0.64
CHRNA4P43681 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.06■□□□□ 0.64
CHRNA4P43681 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.06■□□□□ 0.64
CHRNA4P43681 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.06■□□□□ 0.64
CHRNA4P43681 MIR4497-201ENST00000583208 89 ntBASIC19.06■□□□□ 0.64
CHRNA4P43681 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.06■□□□□ 0.64
CHRNA4P43681 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.06■□□□□ 0.64
CHRNA4P43681 AP000525.1-201ENST00000608286 694 ntBASIC19.06■□□□□ 0.64
CHRNA4P43681 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.06■□□□□ 0.64
CHRNA4P43681 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 AL031598.1-201ENST00000561511 1773 ntBASIC19.06■□□□□ 0.64
CHRNA4P43681 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA4P43681 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.05■□□□□ 0.64
CHRNA4P43681 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHRNA4P43681 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRNA4P43681 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRNA4P43681 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CHRNA4P43681 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHRNA4P43681 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.05■□□□□ 0.64
CHRNA4P43681 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 AL596275.1-201ENST00000423464 877 ntBASIC19.05■□□□□ 0.64
CHRNA4P43681 AL390955.1-201ENST00000428694 934 ntBASIC19.05■□□□□ 0.64
CHRNA4P43681 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.05■□□□□ 0.64
CHRNA4P43681 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRNA4P43681 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CHRNA4P43681 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRNA4P43681 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.05■□□□□ 0.64
CHRNA4P43681 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRNA4P43681 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA4P43681 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA4P43681 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA4P43681 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA4P43681 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CHRNA4P43681 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA4P43681 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA4P43681 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.04■□□□□ 0.64
CHRNA4P43681 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA4P43681 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA4P43681 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CHRNA4P43681 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA4P43681 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA4P43681 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA4P43681 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA4P43681 KRT8P3-201ENST00000519669 1449 ntBASIC19.04■□□□□ 0.64
CHRNA4P43681 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA4P43681 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CHRNA4P43681 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA4P43681 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA4P43681 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA4P43681 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA4P43681 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
CHRNA4P43681 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA4P43681 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA4P43681 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA4P43681 AC093525.10-201ENST00000625130 1569 ntBASIC19.03■□□□□ 0.64
CHRNA4P43681 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.03■□□□□ 0.64
CHRNA4P43681 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA4P43681 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA4P43681 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA4P43681 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRNA4P43681 AC008622.2-201ENST00000617006 1229 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms