Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Gm6139-201ENSMUST00000079261 882 ntBASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-3A0A075B6A4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.02□□□□□ -0.48
Trav12d-3A0A075B6A4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-3A0A075B6A4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav12d-3A0A075B6A4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-3A0A075B6A4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-3A0A075B6A4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-3A0A075B6A4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-3A0A075B6A4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm27000-201ENSMUST00000182943 842 ntBASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm45417-201ENSMUST00000209533 758 ntBASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Rps24-207ENSMUST00000224568 714 ntBASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-3A0A075B6A4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav12d-3A0A075B6A4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12d-3A0A075B6A4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms