Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.84□□□□□ -1.95
DDX41Q9UJV9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.84□□□□□ -1.95
DDX41Q9UJV9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
DDX41Q9UJV9 RNU6-1209P-201ENST00000363655 107 ntBASIC2.83□□□□□ -1.96
DDX41Q9UJV9 MIR1278-201ENST00000408753 81 ntBASIC2.83□□□□□ -1.96
DDX41Q9UJV9 AC245047.3-201ENST00000429428 127 ntBASIC2.83□□□□□ -1.96
DDX41Q9UJV9 RPS12P2-201ENST00000439728 269 ntBASIC2.83□□□□□ -1.96
DDX41Q9UJV9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.83□□□□□ -1.96
DDX41Q9UJV9 MIR4431-201ENST00000579990 94 ntBASIC2.83□□□□□ -1.96
DDX41Q9UJV9 AC064859.1-201ENST00000624741 174 ntBASIC2.83□□□□□ -1.96
DDX41Q9UJV9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
DDX41Q9UJV9 SNORA1B-201ENST00000362535 133 ntBASIC2.82□□□□□ -1.96
DDX41Q9UJV9 SNORA3A-201ENST00000364113 130 ntBASIC2.82□□□□□ -1.96
DDX41Q9UJV9 RNA5SP210-201ENST00000391034 120 ntBASIC2.82□□□□□ -1.96
DDX41Q9UJV9 MIR548M-201ENST00000408260 86 ntBASIC2.82□□□□□ -1.96
DDX41Q9UJV9 RNU2-55P-201ENST00000411146 174 ntBASIC2.82□□□□□ -1.96
DDX41Q9UJV9 SEPT7P4-201ENST00000437076 306 ntBASIC2.82□□□□□ -1.96
DDX41Q9UJV9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.82□□□□□ -1.96
DDX41Q9UJV9 RNA5SP82-201ENST00000516707 92 ntBASIC2.82□□□□□ -1.96
DDX41Q9UJV9 RNU6-1212P-201ENST00000517023 104 ntBASIC2.82□□□□□ -1.96
DDX41Q9UJV9 AL049861.1-201ENST00000603130 150 ntBASIC2.82□□□□□ -1.96
DDX41Q9UJV9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
DDX41Q9UJV9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
DDX41Q9UJV9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
DDX41Q9UJV9 Y_RNA.796-201ENST00000364268 102 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 Y_RNA.799-201ENST00000364992 102 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 RNU6-950P-201ENST00000384651 107 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 MIR15B-201ENST00000385045 98 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 SNORA48.1-201ENST00000390879 135 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 SNORA3.2-201ENST00000408221 125 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 RNU6-1135P-201ENST00000411083 103 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 AC107027.2-201ENST00000512197 115 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 RNU6-126P-201ENST00000516685 103 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 RNU7-28P-201ENST00000516759 62 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 AL021707.8-201ENST00000609428 183 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 uc_338.4-201ENST00000616635 176 ntBASIC2.81□□□□□ -1.96
DDX41Q9UJV9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
DDX41Q9UJV9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
DDX41Q9UJV9 Y_RNA.242-201ENST00000364473 110 ntBASIC2.8□□□□□ -1.96
DDX41Q9UJV9 Y_RNA.253-201ENST00000364562 112 ntBASIC2.8□□□□□ -1.96
DDX41Q9UJV9 Y_RNA.265-201ENST00000364677 108 ntBASIC2.8□□□□□ -1.96
DDX41Q9UJV9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
DDX41Q9UJV9 AL359511.1-201ENST00000402970 211 ntBASIC2.8□□□□□ -1.96
DDX41Q9UJV9 RNU2-7P-201ENST00000410794 178 ntBASIC2.8□□□□□ -1.96
DDX41Q9UJV9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX41Q9UJV9 SNRPGP10-201ENST00000432323 225 ntBASIC2.8□□□□□ -1.96
DDX41Q9UJV9 RNU7-193P-201ENST00000516723 65 ntBASIC2.8□□□□□ -1.96
DDX41Q9UJV9 AC022217.4-201ENST00000604389 163 ntBASIC2.8□□□□□ -1.96
DDX41Q9UJV9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.8□□□□□ -1.96
DDX41Q9UJV9 AC104465.1-201ENST00000611365 139 ntBASIC2.8□□□□□ -1.96
DDX41Q9UJV9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DDX41Q9UJV9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
DDX41Q9UJV9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
DDX41Q9UJV9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX41Q9UJV9 MIR126-201ENST00000362291 85 ntBASIC2.79□□□□□ -1.96
DDX41Q9UJV9 RNA5SP456-201ENST00000364002 114 ntBASIC2.79□□□□□ -1.96
DDX41Q9UJV9 RNA5SP482-201ENST00000391269 118 ntBASIC2.79□□□□□ -1.96
DDX41Q9UJV9 RNU6-394P-201ENST00000410735 107 ntBASIC2.79□□□□□ -1.96
DDX41Q9UJV9 RN7SKP192-201ENST00000411291 327 ntBASIC2.79□□□□□ -1.96
DDX41Q9UJV9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.79□□□□□ -1.96
DDX41Q9UJV9 SNORA31.25-201ENST00000517242 134 ntBASIC2.79□□□□□ -1.96
DDX41Q9UJV9 MIR3144-201ENST00000579460 79 ntBASIC2.79□□□□□ -1.96
DDX41Q9UJV9 SNORA28-201ENST00000606769 126 ntBASIC2.79□□□□□ -1.96
DDX41Q9UJV9 AL365434.2-201ENST00000607979 234 ntBASIC2.79□□□□□ -1.96
DDX41Q9UJV9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.79□□□□□ -1.96
DDX41Q9UJV9 AC005336.3-201ENST00000623833 2679 ntBASIC2.79□□□□□ -1.96
DDX41Q9UJV9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
DDX41Q9UJV9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.78□□□□□ -1.96
DDX41Q9UJV9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
DDX41Q9UJV9 ZNF658B-202ENST00000615961 3375 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 Y_RNA.8-201ENST00000362353 102 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 RNU4-84P-201ENST00000364200 139 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 Y_RNA.272-201ENST00000364696 102 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 MIR520A-201ENST00000384862 85 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 RNU6-239P-201ENST00000390990 99 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 RNA5SP109-201ENST00000391010 116 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 RNU4-53P-201ENST00000410828 140 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 Y_RNA.622-201ENST00000411091 108 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 MLLT10P1-201ENST00000418346 262 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 MTND2P29-201ENST00000438595 412 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 SUMO1P3-201ENST00000439961 304 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.78□□□□□ -1.96
DDX41Q9UJV9 SNORD11-201ENST00000459124 84 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 OR9P1P-201ENST00000496431 281 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 RNU6-237P-201ENST00000515985 71 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 RNU6-1299P-201ENST00000516316 100 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 MIR4662B-201ENST00000579498 81 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 AC087685.1-201ENST00000587507 141 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 AC245884.12-201ENST00000615364 59 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 MTND1P7-201ENST00000632801 297 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
DDX41Q9UJV9 AC007336.1-201ENST00000576365 3828 ntBASIC2.78□□□□□ -1.96
DDX41Q9UJV9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
DDX41Q9UJV9 Y_RNA.432-201ENST00000384087 111 ntBASIC2.77□□□□□ -1.97
DDX41Q9UJV9 RNU6-131P-201ENST00000391144 107 ntBASIC2.77□□□□□ -1.97
DDX41Q9UJV9 SNORA26-201ENST00000391286 122 ntBASIC2.77□□□□□ -1.97
DDX41Q9UJV9 RNA5SP501-201ENST00000410990 112 ntBASIC2.77□□□□□ -1.97
DDX41Q9UJV9 Z98742.3-201ENST00000418637 326 ntBASIC2.77□□□□□ -1.97
DDX41Q9UJV9 AC245047.4-201ENST00000433189 144 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms