Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 RNU6-365P-201ENST00000517113 106 ntBASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 AC112693.2-201ENST00000556538 232 ntBASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 AP001485.1-201ENST00000604799 199 ntBASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 AC005000.2-201ENST00000605468 310 ntBASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VTI1BQ9UEU0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VTI1BQ9UEU0 Y_RNA.568-201ENST00000384742 113 ntBASIC2.79□□□□□ -1.96
VTI1BQ9UEU0 MIR483-201ENST00000385070 76 ntBASIC2.79□□□□□ -1.96
VTI1BQ9UEU0 SNORA48.2-201ENST00000390926 124 ntBASIC2.79□□□□□ -1.96
VTI1BQ9UEU0 MIR513C-201ENST00000401352 84 ntBASIC2.79□□□□□ -1.96
VTI1BQ9UEU0 AL158823.1-201ENST00000418441 478 ntBASIC2.79□□□□□ -1.96
VTI1BQ9UEU0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.79□□□□□ -1.96
VTI1BQ9UEU0 RNU6-426P-201ENST00000516464 97 ntBASIC2.79□□□□□ -1.96
VTI1BQ9UEU0 RNA5SP437-201ENST00000517249 129 ntBASIC2.79□□□□□ -1.96
VTI1BQ9UEU0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 AC096644.4-201ENST00000563417 2912 ntBASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 MIR26A1-201ENST00000362205 77 ntBASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 Y_RNA.66-201ENST00000362862 102 ntBASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 RNU6-851P-201ENST00000384565 107 ntBASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 RNU6-296P-201ENST00000384608 107 ntBASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 MIR524-201ENST00000385242 87 ntBASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 RNU2-7P-201ENST00000410794 178 ntBASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 SNORA25.12-201ENST00000516202 82 ntBASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 RNU2-19P-201ENST00000517288 84 ntBASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 AC132825.6-201ENST00000638861 357 ntBASIC2.78□□□□□ -1.96
VTI1BQ9UEU0 SNORA25.7-201ENST00000364375 127 ntBASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 SNORD50B-201ENST00000364995 70 ntBASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 SNORA4.2-201ENST00000365313 147 ntBASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 Y_RNA.497-201ENST00000384447 98 ntBASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 MIR802-201ENST00000390235 94 ntBASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 AL034345.1-201ENST00000407768 123 ntBASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 RPL30P13-201ENST00000418873 348 ntBASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 RPL23AP63-201ENST00000498752 471 ntBASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 MIR5194-201ENST00000582634 120 ntBASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
VTI1BQ9UEU0 RNU6-1084P-201ENST00000362498 107 ntBASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 SNORD14E-201ENST00000364009 85 ntBASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 MIR128-1-201ENST00000384921 82 ntBASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 SUMO1P4-201ENST00000429430 302 ntBASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 AC022018.1-201ENST00000430685 241 ntBASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 RNU6-504P-201ENST00000516568 104 ntBASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 RNU6-826P-201ENST00000516827 104 ntBASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 AC004486.1-201ENST00000546846 233 ntBASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 AC078899.2-201ENST00000595282 212 ntBASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 RPL12P50-201ENST00000603116 116 ntBASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.76□□□□□ -1.97
VTI1BQ9UEU0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 AL157777.2-201ENST00000258070 137 ntBASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 RNU6-525P-201ENST00000363685 104 ntBASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 SNORD24-201ENST00000383884 75 ntBASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 RNU6-442P-201ENST00000383968 104 ntBASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 SNORD23.1-201ENST00000408212 104 ntBASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 RNU7-197P-201ENST00000458836 62 ntBASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 AC003982.1-202ENST00000469928 248 ntBASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 AC055731.1-201ENST00000474387 401 ntBASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 RNA5SP481-201ENST00000516814 122 ntBASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
VTI1BQ9UEU0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 RNU6-1082P-201ENST00000364574 107 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 SNORA67.1-201ENST00000364749 141 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 SNORA44-201ENST00000384584 132 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 RNU6-588P-201ENST00000410281 105 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 RNA5SP100-201ENST00000410903 110 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 RNA5SP59-201ENST00000410922 110 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 HMGN2P32-201ENST00000444648 269 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 SNORD45.4-201ENST00000516629 73 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 AC007751.1-201ENST00000529260 376 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 ZNF861P-201ENST00000588126 639 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VTI1BQ9UEU0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VTI1BQ9UEU0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.73□□□□□ -1.97
VTI1BQ9UEU0 MIRLET7C-201ENST00000362160 84 ntBASIC2.73□□□□□ -1.97
VTI1BQ9UEU0 Y_RNA.336-201ENST00000365307 109 ntBASIC2.73□□□□□ -1.97
VTI1BQ9UEU0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.73□□□□□ -1.97
VTI1BQ9UEU0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.73□□□□□ -1.97
VTI1BQ9UEU0 AC105272.1-201ENST00000438604 198 ntBASIC2.73□□□□□ -1.97
VTI1BQ9UEU0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.73□□□□□ -1.97
VTI1BQ9UEU0 CYCTP-201ENST00000504253 315 ntBASIC2.73□□□□□ -1.97
VTI1BQ9UEU0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.73□□□□□ -1.97
VTI1BQ9UEU0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
VTI1BQ9UEU0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.72□□□□□ -1.97
VTI1BQ9UEU0 RNU6-888P-201ENST00000363010 101 ntBASIC2.72□□□□□ -1.97
VTI1BQ9UEU0 SNORA80E-201ENST00000384744 137 ntBASIC2.72□□□□□ -1.97
VTI1BQ9UEU0 SNRPGP13-201ENST00000442212 177 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms