Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 Y_RNA.122-201ENST00000363331 96 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 RNU6-682P-201ENST00000363843 106 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.200-201ENST00000364018 102 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.331-201ENST00000365267 102 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.383-201ENST00000383855 97 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 RNU6-187P-201ENST00000384139 106 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.569-201ENST00000384749 103 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 MIR150-201ENST00000385048 84 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.626-201ENST00000411288 95 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 RAB28P5-201ENST00000427490 651 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 snoU13.9-201ENST00000458927 103 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 AC005908.1-201ENST00000468701 347 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 AC091144.1-201ENST00000519573 138 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 AC018448.1-201ENST00000552843 316 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 MIR4753-201ENST00000585119 83 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 AC010999.1-201ENST00000611856 324 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 AC068205.3-201ENST00000636385 468 ntBASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
CLIP2Q9UDT6 MIR411-201ENST00000362239 96 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 MIR337-201ENST00000362281 93 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 RNY1P10-201ENST00000363268 113 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.275-201ENST00000364726 110 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 RNU6-923P-201ENST00000364753 107 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 RNY4P28-201ENST00000365281 93 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 RNU6-1062P-201ENST00000383908 107 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.785-201ENST00000384290 109 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 MIR520A-201ENST00000384862 85 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 AL117342.1-201ENST00000404861 406 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 COX6CP10-201ENST00000416832 224 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 AC245047.4-201ENST00000433189 144 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 AC004386.2-201ENST00000441858 148 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 RNU1-123P-201ENST00000458950 160 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.683-201ENST00000516508 93 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 RNU2-31P-201ENST00000516954 155 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 AC084364.2-201ENST00000546924 395 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 DEFB117-201ENST00000602356 141 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 AC005828.6-201ENST00000606610 232 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 BX284668.6-201ENST00000606899 438 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 SNORD113-5-201ENST00000607261 78 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 AC098479.1-201ENST00000609225 154 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 AC004467.1-201ENST00000615678 330 ntBASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CLIP2Q9UDT6 BX322639.1-202ENST00000423987 2213 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-862P-201ENST00000362804 105 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.83-201ENST00000363005 113 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.199-201ENST00000364014 102 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.292-201ENST00000364904 97 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-418P-201ENST00000384035 107 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-886P-201ENST00000384319 105 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-1289P-201ENST00000384431 106 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-1235P-201ENST00000384559 107 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-21P-201ENST00000384710 107 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-360P-201ENST00000390944 104 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 EBAG9P1-201ENST00000418955 543 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 UQCRBP2-201ENST00000447827 297 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.644-201ENST00000459006 113 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-625P-201ENST00000459412 107 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-498P-201ENST00000459468 107 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 SEPT14P8-201ENST00000508026 178 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU4-71P-201ENST00000516258 113 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.674-201ENST00000516362 113 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-948P-201ENST00000516374 107 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 RNU6-861P-201ENST00000516745 106 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 MIR4308-201ENST00000580634 81 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 MIR5006-201ENST00000583027 110 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 AC005176.2-201ENST00000596933 147 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 SNRPGP20-201ENST00000604477 205 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 AC022441.3-201ENST00000605737 136 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.55□□□□□ -2.16
CLIP2Q9UDT6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 MIR410-201ENST00000362222 80 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.29-201ENST00000362570 113 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 RNU6-414P-201ENST00000363705 104 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.179-201ENST00000363844 90 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 SNORA63D-201ENST00000364359 132 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 RNU6-326P-201ENST00000365480 107 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 RNU6-793P-201ENST00000384233 104 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 RNU4-70P-201ENST00000384579 139 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.555-201ENST00000384673 110 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 RNU4-61P-201ENST00000411243 107 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 AC060773.1-201ENST00000421698 310 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 AC114982.1-201ENST00000469402 321 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 AC004223.1-201ENST00000479840 271 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 RNU1-117P-201ENST00000517041 158 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 AL008718.3-201ENST00000610217 321 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 AC006001.4-201ENST00000622243 395 ntBASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.172-201ENST00000363765 102 ntBASIC1.53□□□□□ -2.16
CLIP2Q9UDT6 Y_RNA.180-201ENST00000363867 113 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms