Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 SNORA72-201ENST00000384339 132 ntBASIC2.47□□□□□ -2.01
USP35Q9P2H5 SNORA12.1-201ENST00000390873 148 ntBASIC2.47□□□□□ -2.01
USP35Q9P2H5 AL118496.2-201ENST00000448300 230 ntBASIC2.47□□□□□ -2.01
USP35Q9P2H5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.47□□□□□ -2.01
USP35Q9P2H5 AC015688.6-201ENST00000577737 104 ntBASIC2.47□□□□□ -2.01
USP35Q9P2H5 MIR3145-201ENST00000580727 82 ntBASIC2.47□□□□□ -2.01
USP35Q9P2H5 ICE2P2-201ENST00000483823 2787 ntBASIC2.47□□□□□ -2.01
USP35Q9P2H5 snoU2_19.2-201ENST00000363024 80 ntBASIC2.46□□□□□ -2.02
USP35Q9P2H5 SNORA63C-201ENST00000364578 129 ntBASIC2.46□□□□□ -2.02
USP35Q9P2H5 Y_RNA.418-201ENST00000384029 102 ntBASIC2.46□□□□□ -2.02
USP35Q9P2H5 RNU6-1109P-201ENST00000391187 107 ntBASIC2.46□□□□□ -2.02
USP35Q9P2H5 AC233266.1-201ENST00000454518 96 ntBASIC2.46□□□□□ -2.02
USP35Q9P2H5 AC005908.1-201ENST00000468701 347 ntBASIC2.46□□□□□ -2.02
USP35Q9P2H5 AC136628.3-201ENST00000521868 290 ntBASIC2.46□□□□□ -2.02
USP35Q9P2H5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.46□□□□□ -2.02
USP35Q9P2H5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.46□□□□□ -2.02
USP35Q9P2H5 AC011604.1-201ENST00000545978 196 ntBASIC2.46□□□□□ -2.02
USP35Q9P2H5 MIR3122-201ENST00000577243 73 ntBASIC2.46□□□□□ -2.02
USP35Q9P2H5 AC242852.1-201ENST00000612151 96 ntBASIC2.46□□□□□ -2.02
USP35Q9P2H5 AC244015.1-201ENST00000622301 99 ntBASIC2.46□□□□□ -2.02
USP35Q9P2H5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
USP35Q9P2H5 MIR302D-201ENST00000362275 68 ntBASIC2.45□□□□□ -2.02
USP35Q9P2H5 SNORD33-201ENST00000362761 85 ntBASIC2.45□□□□□ -2.02
USP35Q9P2H5 RNU4-80P-201ENST00000363200 141 ntBASIC2.45□□□□□ -2.02
USP35Q9P2H5 RNU6-326P-201ENST00000365480 107 ntBASIC2.45□□□□□ -2.02
USP35Q9P2H5 RNU6-738P-201ENST00000384531 106 ntBASIC2.45□□□□□ -2.02
USP35Q9P2H5 SNORA53-201ENST00000391141 249 ntBASIC2.45□□□□□ -2.02
USP35Q9P2H5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.45□□□□□ -2.02
USP35Q9P2H5 OR9P1P-201ENST00000496431 281 ntBASIC2.45□□□□□ -2.02
USP35Q9P2H5 DNAJC19P9-201ENST00000555084 351 ntBASIC2.45□□□□□ -2.02
USP35Q9P2H5 MIR4422-201ENST00000581938 83 ntBASIC2.45□□□□□ -2.02
USP35Q9P2H5 AC037487.3-201ENST00000606668 112 ntBASIC2.45□□□□□ -2.02
USP35Q9P2H5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
USP35Q9P2H5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
USP35Q9P2H5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.44□□□□□ -2.02
USP35Q9P2H5 RNU6-191P-201ENST00000516295 94 ntBASIC2.44□□□□□ -2.02
USP35Q9P2H5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.44□□□□□ -2.02
USP35Q9P2H5 AP003357.1-201ENST00000604497 148 ntBASIC2.44□□□□□ -2.02
USP35Q9P2H5 Y_RNA.64-201ENST00000362845 102 ntBASIC2.43□□□□□ -2.02
USP35Q9P2H5 RNU6-806P-201ENST00000365147 105 ntBASIC2.43□□□□□ -2.02
USP35Q9P2H5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
USP35Q9P2H5 RNU1-78P-201ENST00000391248 165 ntBASIC2.43□□□□□ -2.02
USP35Q9P2H5 RPL21P38-201ENST00000418090 167 ntBASIC2.43□□□□□ -2.02
USP35Q9P2H5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.43□□□□□ -2.02
USP35Q9P2H5 HSPE1P24-201ENST00000450782 238 ntBASIC2.43□□□□□ -2.02
USP35Q9P2H5 MTND5P22-201ENST00000458380 195 ntBASIC2.43□□□□□ -2.02
USP35Q9P2H5 RNU7-95P-201ENST00000459222 64 ntBASIC2.43□□□□□ -2.02
USP35Q9P2H5 AC098869.1-201ENST00000481627 292 ntBASIC2.43□□□□□ -2.02
USP35Q9P2H5 RNU2-31P-201ENST00000516954 155 ntBASIC2.43□□□□□ -2.02
USP35Q9P2H5 CBX3P4-201ENST00000538909 354 ntBASIC2.43□□□□□ -2.02
USP35Q9P2H5 AC068647.2-201ENST00000637380 353 ntBASIC2.43□□□□□ -2.02
USP35Q9P2H5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
USP35Q9P2H5 RNU6-1105P-201ENST00000384774 107 ntBASIC2.42□□□□□ -2.02
USP35Q9P2H5 MIR660-201ENST00000385235 97 ntBASIC2.42□□□□□ -2.02
USP35Q9P2H5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.42□□□□□ -2.02
USP35Q9P2H5 AL135790.2-201ENST00000437701 267 ntBASIC2.42□□□□□ -2.02
USP35Q9P2H5 AL078604.3-201ENST00000615580 211 ntBASIC2.42□□□□□ -2.02
USP35Q9P2H5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.42□□□□□ -2.02
USP35Q9P2H5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.42□□□□□ -2.02
USP35Q9P2H5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USP35Q9P2H5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP35Q9P2H5 RNU6-424P-201ENST00000384367 105 ntBASIC2.41□□□□□ -2.02
USP35Q9P2H5 Y_RNA.541-201ENST00000384640 113 ntBASIC2.41□□□□□ -2.02
USP35Q9P2H5 MTCO1P5-201ENST00000433573 344 ntBASIC2.41□□□□□ -2.02
USP35Q9P2H5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.41□□□□□ -2.02
USP35Q9P2H5 Y_RNA.26-201ENST00000362539 101 ntBASIC2.4□□□□□ -2.03
USP35Q9P2H5 Y_RNA.84-201ENST00000363011 104 ntBASIC2.4□□□□□ -2.03
USP35Q9P2H5 RNU4-41P-201ENST00000364426 143 ntBASIC2.4□□□□□ -2.03
USP35Q9P2H5 MIR215-201ENST00000384858 110 ntBASIC2.4□□□□□ -2.03
USP35Q9P2H5 MIR513A1-201ENST00000385138 129 ntBASIC2.4□□□□□ -2.03
USP35Q9P2H5 AC104332.1-201ENST00000440471 797 ntBASIC2.4□□□□□ -2.03
USP35Q9P2H5 snoU13.18-201ENST00000459483 104 ntBASIC2.4□□□□□ -2.03
USP35Q9P2H5 RNU7-115P-201ENST00000516433 55 ntBASIC2.4□□□□□ -2.03
USP35Q9P2H5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.4□□□□□ -2.03
USP35Q9P2H5 POLR3GP1-201ENST00000594073 261 ntBASIC2.4□□□□□ -2.03
USP35Q9P2H5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.4□□□□□ -2.03
USP35Q9P2H5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
USP35Q9P2H5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USP35Q9P2H5 SNORD1A-201ENST00000364968 72 ntBASIC2.39□□□□□ -2.03
USP35Q9P2H5 RNU6-1080P-201ENST00000383982 107 ntBASIC2.39□□□□□ -2.03
USP35Q9P2H5 SNORA72.4-201ENST00000384174 132 ntBASIC2.39□□□□□ -2.03
USP35Q9P2H5 RNU6-713P-201ENST00000384761 107 ntBASIC2.39□□□□□ -2.03
USP35Q9P2H5 MIR548F4-201ENST00000408515 105 ntBASIC2.39□□□□□ -2.03
USP35Q9P2H5 Y_RNA.621-201ENST00000411065 96 ntBASIC2.39□□□□□ -2.03
USP35Q9P2H5 RPL31P63-201ENST00000422565 375 ntBASIC2.39□□□□□ -2.03
USP35Q9P2H5 DYNLT3P2-201ENST00000442517 295 ntBASIC2.39□□□□□ -2.03
USP35Q9P2H5 MIR548AY-201ENST00000617669 107 ntBASIC2.39□□□□□ -2.03
USP35Q9P2H5 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.39□□□□□ -2.03
USP35Q9P2H5 MIR8063-201ENST00000621930 81 ntBASIC2.39□□□□□ -2.03
USP35Q9P2H5 Y_RNA.162-201ENST00000363683 102 ntBASIC2.38□□□□□ -2.03
USP35Q9P2H5 U8.5-201ENST00000364528 136 ntBASIC2.38□□□□□ -2.03
USP35Q9P2H5 SNORA67.5-201ENST00000391036 107 ntBASIC2.38□□□□□ -2.03
USP35Q9P2H5 Z98949.2-201ENST00000440996 144 ntBASIC2.38□□□□□ -2.03
USP35Q9P2H5 RNA5SP168-201ENST00000516642 112 ntBASIC2.38□□□□□ -2.03
USP35Q9P2H5 AC024405.2-202ENST00000532731 184 ntBASIC2.38□□□□□ -2.03
USP35Q9P2H5 AC127455.1-201ENST00000565496 145 ntBASIC2.38□□□□□ -2.03
USP35Q9P2H5 MIR4762-201ENST00000585261 75 ntBASIC2.38□□□□□ -2.03
USP35Q9P2H5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.38□□□□□ -2.03
USP35Q9P2H5 AC008737.2-201ENST00000599446 118 ntBASIC2.38□□□□□ -2.03
USP35Q9P2H5 AL512598.1-201ENST00000610158 273 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms