Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC008269.2-201ENST00000561915 1105 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 MIR4781-201ENST00000585250 76 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 AL512605.2-201ENST00000592972 256 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 POLR3GP1-201ENST00000594073 261 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 AL360085.1-201ENST00000604713 532 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 AC007742.2-201ENST00000618226 398 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 SNORD3E-202ENST00000627253 216 ntBASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.84-201ENST00000363011 104 ntBASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 SNORD68-201ENST00000363214 84 ntBASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 RNU6-1048P-201ENST00000364054 107 ntBASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 RNU6-738P-201ENST00000384531 106 ntBASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 MIR194-1-201ENST00000384892 85 ntBASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 MIR513A1-201ENST00000385138 129 ntBASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 SNORA12.1-201ENST00000390873 148 ntBASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 RNA5SP482-201ENST00000391269 118 ntBASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 CALM2P4-201ENST00000430810 426 ntBASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 MTCO1P5-201ENST00000433573 344 ntBASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 AL135790.2-201ENST00000437701 267 ntBASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.67□□□□□ -2.14
HCN3Q9P1Z3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.16-201ENST00000362421 102 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 Y_RNA.136-201ENST00000363444 102 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 RNU4-41P-201ENST00000364426 143 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 SNORA72-201ENST00000384339 132 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 AL161935.2-201ENST00000414627 60 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 MLLT10P1-201ENST00000418346 262 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 OR9P1P-201ENST00000496431 281 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 RNU6-327P-201ENST00000516270 127 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 RNA5SP168-201ENST00000516642 112 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 RNU7-116P-201ENST00000516940 62 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 SCARNA24.2-201ENST00000516968 130 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 MIR4778-201ENST00000577635 80 ntBASIC1.66□□□□□ -2.14
HCN3Q9P1Z3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.14
HCN3Q9P1Z3 AC134026.1-201ENST00000623249 2239 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 MIR126-201ENST00000362291 85 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.162-201ENST00000363683 102 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 U8.7-201ENST00000364940 136 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 RNU6-1323P-201ENST00000384025 107 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 RNU6-1105P-201ENST00000384774 107 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 U8.16-201ENST00000391279 133 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 Z98949.2-201ENST00000440996 144 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 RPL23AP54-201ENST00000495129 419 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 SCARNA15.1-201ENST00000516384 125 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 SNORA25.15-201ENST00000516487 89 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 AC019176.1-201ENST00000518519 225 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 AC136628.3-201ENST00000521868 290 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 AC024405.2-202ENST00000532731 184 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 AL513423.1-201ENST00000621695 132 ntBASIC1.65□□□□□ -2.15
HCN3Q9P1Z3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 SNORD1A-201ENST00000364968 72 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 RNU6-326P-201ENST00000365480 107 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 RNU6-338P-201ENST00000383888 105 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 MTCO2P33-201ENST00000402100 465 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 RNU2-14P-201ENST00000411053 191 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 AC104332.1-201ENST00000440471 797 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 MTND4LP30-201ENST00000454092 297 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 AC079140.2-201ENST00000506193 142 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 RNU7-12P-201ENST00000516030 62 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 RNU7-115P-201ENST00000516433 55 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 MIR3618-201ENST00000580330 88 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 AC136443.5-201ENST00000603741 370 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 PRR13P7-201ENST00000605538 430 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 MIR502-201ENST00000606349 86 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 AL591926.4-201ENST00000616895 298 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 MIR548AY-201ENST00000617669 107 ntBASIC1.64□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.176-201ENST00000363815 109 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 RNU6-801P-201ENST00000364087 105 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 RNU6-424P-201ENST00000384367 105 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 MIR660-201ENST00000385235 97 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 RPL31P63-201ENST00000422565 375 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 MTND2P23-201ENST00000422990 651 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 RNU7-141P-201ENST00000459304 62 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 TRBVB-201ENST00000477100 408 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 RNU6-1338P-201ENST00000516328 91 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 RNU6-250P-201ENST00000516958 103 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 DEFB108E-201ENST00000524692 240 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 AC015688.6-201ENST00000577737 104 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 MIR3937-201ENST00000580135 106 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 AP003357.1-201ENST00000604497 148 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 AL353621.2-201ENST00000605340 133 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 AC106754.2-201ENST00000623006 233 ntBASIC1.63□□□□□ -2.15
HCN3Q9P1Z3 WWP1P1-201ENST00000466609 2769 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.376-201ENST00000365638 108 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 SNORA72.4-201ENST00000384174 132 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.62□□□□□ -2.15
HCN3Q9P1Z3 Y_RNA.574-201ENST00000384766 95 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 306.5 ms