Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-407P-201ENST00000365280 104 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-117P-201ENST00000365415 107 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 Y_RNA.456-201ENST00000384232 111 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 SNORA67.3-201ENST00000384366 140 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 Y_RNA.506-201ENST00000384494 102 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-125P-201ENST00000384505 107 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 MIR764-201ENST00000390811 85 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-493P-201ENST00000391321 108 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 RPS20P10-201ENST00000451209 253 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 AC091021.1-201ENST00000468051 388 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 AC011406.1-201ENST00000512440 370 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 RNA5SP20-201ENST00000515976 84 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 RNA5SP182-201ENST00000516064 82 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-63P-201ENST00000516690 95 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 AC004832.4-201ENST00000608952 331 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 AC108706.1-201ENST00000611053 297 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 U1.36-201ENST00000620684 176 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 AC134026.1-201ENST00000623249 2239 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 ZNF702P-202ENST00000434269 1966 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 Y_RNA.7-201ENST00000362352 102 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 SNORA33-201ENST00000363664 130 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 Y_RNA.341-201ENST00000365341 102 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU4-17P-201ENST00000365598 141 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 Y_RNA.441-201ENST00000384123 112 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 Y_RNA.571-201ENST00000384753 98 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-394P-201ENST00000410735 107 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 HMGN2P34-201ENST00000437647 269 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-1219P-201ENST00000516143 112 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 MIR3910-1-201ENST00000580936 111 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 AC013791.1-201ENST00000616619 62 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 AC022513.1-201ENST00000624512 117 ntBASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
NCKIPSDQ9NZQ3 CENPCP1-201ENST00000533085 2578 ntBASIC2.03□□□□□ -2.09
NCKIPSDQ9NZQ3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.170-201ENST00000363746 110 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-312P-201ENST00000364629 107 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-187P-201ENST00000384139 106 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 U8.13-201ENST00000390842 128 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 RN7SKP51-201ENST00000410781 304 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 RNA5SP501-201ENST00000410990 112 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 AL353689.1-201ENST00000438895 199 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 HSPE1P13-201ENST00000451143 297 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 RPS27P21-201ENST00000486977 252 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 AC010409.1-201ENST00000487382 476 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 AC005840.1-201ENST00000498412 377 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU7-128P-201ENST00000517247 62 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 AC100767.1-201ENST00000528178 123 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR5688-201ENST00000580619 83 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR3935-201ENST00000583472 104 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 AC006435.5-201ENST00000624486 112 ntBASIC2.02□□□□□ -2.09
NCKIPSDQ9NZQ3 AL157777.2-201ENST00000258070 137 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.23-201ENST00000362496 106 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU1-22P-201ENST00000363334 158 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-271P-201ENST00000363858 105 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-899P-201ENST00000363947 107 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 SNORD50.2-201ENST00000365465 70 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR583-201ENST00000384846 75 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 MTCO2P33-201ENST00000402100 465 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 AL023284.1-201ENST00000403956 276 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 AL117342.1-201ENST00000404861 406 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-1135P-201ENST00000411083 103 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU7-141P-201ENST00000459304 62 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 RPS27P22-201ENST00000478056 241 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 AC097462.1-201ENST00000514125 324 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU7-200P-201ENST00000516105 62 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR3144-201ENST00000579460 79 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 AC021753.1-201ENST00000635724 168 ntBASIC2.01□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-862P-201ENST00000362804 105 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 snoU2-30.2-201ENST00000362805 70 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.75-201ENST00000362927 97 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-103P-201ENST00000363686 107 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR613-201ENST00000385248 95 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.580-201ENST00000391004 95 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 AL512604.1-201ENST00000404812 257 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 TMSB4XP3-201ENST00000445144 114 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 RNA5SP57-201ENST00000459463 123 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 RN7SKP164-201ENST00000516138 266 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 AC015720.1-201ENST00000565251 277 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR5094-201ENST00000578766 85 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR4438-201ENST00000585271 93 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR338-201ENST00000636369 67 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 U6.108-201ENST00000637764 58 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 AC008555.8-201ENST00000623602 2168 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU1-96P-201ENST00000364163 162 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU4-10P-201ENST00000364383 140 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms