Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 ZNF271P-202ENST00000465539 1970 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 RNU5E-3P-201ENST00000515913 68 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 RNU1-143P-201ENST00000516296 146 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 RNU6-504P-201ENST00000516568 104 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 Y_RNA.690-201ENST00000516603 95 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 RNU1-104P-201ENST00000517280 175 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 RNU2-60P-201ENST00000517290 128 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 AC007751.1-201ENST00000529260 376 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 U1.23-201ENST00000610293 146 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 RNU1-68P-201ENST00000615382 146 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 U1.39-201ENST00000621562 146 ntBASIC3.06□□□□□ -1.92
TMEM39AQ9NV64 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 SNORA33-201ENST00000363664 130 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 Y_RNA.280-201ENST00000364765 112 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 RNU6-160P-201ENST00000384591 107 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 SNORA67.4-201ENST00000384688 142 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 RNU6-1072P-201ENST00000384703 107 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 RNU6-443P-201ENST00000384780 107 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 RN7SKP123-201ENST00000410732 291 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 RNA5SP127-201ENST00000411051 133 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 AC104332.2-201ENST00000429959 156 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 AC009238.1-201ENST00000442165 424 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 AC009237.6-201ENST00000446969 424 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 RN7SL636P-201ENST00000497504 294 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 AC133485.4-201ENST00000561835 220 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 AC138907.4-201ENST00000570107 226 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 AL365205.2-201ENST00000594586 68 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 MIR3914-2-201ENST00000637339 95 ntBASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
TMEM39AQ9NV64 SNORA8-201ENST00000384574 139 ntBASIC3.04□□□□□ -1.92
TMEM39AQ9NV64 RNU6-429P-201ENST00000384582 108 ntBASIC3.04□□□□□ -1.92
TMEM39AQ9NV64 MIR624-201ENST00000385217 97 ntBASIC3.04□□□□□ -1.92
TMEM39AQ9NV64 MIR1262-201ENST00000408276 93 ntBASIC3.04□□□□□ -1.92
TMEM39AQ9NV64 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.04□□□□□ -1.92
TMEM39AQ9NV64 AC018634.1-201ENST00000437554 401 ntBASIC3.04□□□□□ -1.92
TMEM39AQ9NV64 RN7SL633P-201ENST00000488974 297 ntBASIC3.04□□□□□ -1.92
TMEM39AQ9NV64 RNU6-1061P-201ENST00000516530 99 ntBASIC3.04□□□□□ -1.92
TMEM39AQ9NV64 MIR3129-201ENST00000581095 76 ntBASIC3.04□□□□□ -1.92
TMEM39AQ9NV64 MIR6129-201ENST00000616087 109 ntBASIC3.04□□□□□ -1.92
TMEM39AQ9NV64 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
TMEM39AQ9NV64 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 MIR126-201ENST00000362291 85 ntBASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 Y_RNA.52-201ENST00000362760 96 ntBASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 RNU6-508P-201ENST00000363231 103 ntBASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 RNU6-309P-201ENST00000364573 106 ntBASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 RNU6-1144P-201ENST00000384247 104 ntBASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 SNORD72-201ENST00000390994 80 ntBASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 AL117342.1-201ENST00000404861 406 ntBASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 AL445687.1-201ENST00000439946 251 ntBASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 snoU13.15-201ENST00000459407 104 ntBASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 AL358944.1-201ENST00000528537 144 ntBASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 MTND5P34-201ENST00000568888 325 ntBASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
TMEM39AQ9NV64 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.03□□□□□ -1.93
TMEM39AQ9NV64 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 SNORA1-201ENST00000384107 130 ntBASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 SNORD61-201ENST00000384252 73 ntBASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 SNORA3.2-201ENST00000408221 125 ntBASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 Z96811.1-201ENST00000445880 108 ntBASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 RNU6-56P-201ENST00000516986 93 ntBASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 AC008507.4-201ENST00000585464 127 ntBASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 AL591926.4-201ENST00000616895 298 ntBASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 U6.95-201ENST00000636931 70 ntBASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 ZNF658B-202ENST00000615961 3375 ntBASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 AC245060.5-201ENST00000610778 3293 ntBASIC3.02□□□□□ -1.93
TMEM39AQ9NV64 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 RNU6-153P-201ENST00000364422 104 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 MIR515-2-201ENST00000384883 83 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 MIR515-1-201ENST00000384884 83 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 SNORA40.5-201ENST00000391061 128 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 RPL21P3-201ENST00000395517 478 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 MIR891A-201ENST00000401237 79 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 Y_RNA.714-201ENST00000517065 90 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 RNU6-1270P-201ENST00000517128 108 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 AC007536.1-201ENST00000533382 349 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 AC022217.4-201ENST00000604389 163 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 U4atac.1-201ENST00000618345 95 ntBASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.01□□□□□ -1.93
TMEM39AQ9NV64 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3□□□□□ -1.93
TMEM39AQ9NV64 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TMEM39AQ9NV64 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3□□□□□ -1.93
TMEM39AQ9NV64 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
TMEM39AQ9NV64 SNORA1B-201ENST00000362535 133 ntBASIC3□□□□□ -1.93
TMEM39AQ9NV64 RNU6-647P-201ENST00000364243 107 ntBASIC3□□□□□ -1.93
TMEM39AQ9NV64 RNA5SP344-201ENST00000411081 104 ntBASIC3□□□□□ -1.93
TMEM39AQ9NV64 CST2P1-201ENST00000425770 87 ntBASIC3□□□□□ -1.93
TMEM39AQ9NV64 RNU7-94P-201ENST00000459576 63 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms