Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 SNORA1B-201ENST00000362535 133 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.158-201ENST00000363651 101 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 RNU6-1227P-201ENST00000383981 107 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 SNORD26-201ENST00000384147 75 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 SNORD63-201ENST00000384262 68 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 RNU6-102P-201ENST00000384485 104 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 MIR1252-201ENST00000408861 65 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 AL135790.2-201ENST00000437701 267 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 AC005042.3-201ENST00000453230 174 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 RPL39P38-201ENST00000467018 153 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 RPL30P7-201ENST00000479312 323 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 AC098869.1-201ENST00000481627 292 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 RNU2-56P-201ENST00000516826 190 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 AC022616.4-201ENST00000522985 181 ntBASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.11-201ENST00000362375 109 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.214-201ENST00000364201 112 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.526-201ENST00000384572 110 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 ELOCP20-201ENST00000422460 345 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 AC005534.2-201ENST00000431047 433 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 STAG3L5P-204ENST00000443759 179 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 AC233266.1-201ENST00000454518 96 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 MIR4300-201ENST00000581016 96 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 AP001485.1-201ENST00000604799 199 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 AC242852.1-201ENST00000612151 96 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 AL353770.2-201ENST00000620024 78 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 AC244015.1-201ENST00000622301 99 ntBASIC1.62□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.153-201ENST00000363615 91 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 RNU6-694P-201ENST00000364071 147 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 AL590004.1-201ENST00000405321 300 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 RNU6-101P-201ENST00000410323 104 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 RPL30P13-201ENST00000418873 348 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 AL162725.1-201ENST00000435405 301 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 RPS4XP11-201ENST00000446897 772 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 SUMO2P16-201ENST00000519475 264 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 AL512310.8-201ENST00000550183 120 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 AC008269.2-201ENST00000561915 1105 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 AC113195.1-201ENST00000579952 141 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 AC004832.4-201ENST00000608952 331 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 AL157834.3-201ENST00000615543 103 ntBASIC1.61□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.202-201ENST00000364083 110 ntBASIC1.6□□□□□ -2.15
SMC4Q9NTJ3 RNU4-76P-201ENST00000364509 141 ntBASIC1.6□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.6□□□□□ -2.15
SMC4Q9NTJ3 SNORA33.2-201ENST00000365413 134 ntBASIC1.6□□□□□ -2.15
SMC4Q9NTJ3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.6□□□□□ -2.15
SMC4Q9NTJ3 RNA5SP482-201ENST00000391269 118 ntBASIC1.6□□□□□ -2.15
SMC4Q9NTJ3 Z98949.2-201ENST00000440996 144 ntBASIC1.6□□□□□ -2.15
SMC4Q9NTJ3 SNORD3E-202ENST00000627253 216 ntBASIC1.6□□□□□ -2.15
SMC4Q9NTJ3 SNORD113-8-201ENST00000363497 74 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.183-201ENST00000363882 113 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.455-201ENST00000384230 98 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 RNU6-424P-201ENST00000384367 105 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 MIR215-201ENST00000384858 110 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 MIR518E-201ENST00000385252 88 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 SNORD115-46-201ENST00000390982 71 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.602-201ENST00000410535 92 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 AC113618.1-201ENST00000416747 285 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 CALM2P4-201ENST00000430810 426 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 RPS20P10-201ENST00000451209 253 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 OR9P1P-201ENST00000496431 281 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 AC131281.1-201ENST00000522984 164 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 AC090821.2-201ENST00000523552 176 ntBASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.59□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.58□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.58□□□□□ -2.16
SMC4Q9NTJ3 RNU4-41P-201ENST00000364426 143 ntBASIC1.58□□□□□ -2.16
SMC4Q9NTJ3 RNU6-392P-201ENST00000364926 101 ntBASIC1.58□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.58□□□□□ -2.16
SMC4Q9NTJ3 U8.16-201ENST00000391279 133 ntBASIC1.58□□□□□ -2.16
SMC4Q9NTJ3 HSPE1P25-201ENST00000455484 251 ntBASIC1.58□□□□□ -2.16
SMC4Q9NTJ3 AP003072.1-201ENST00000531740 145 ntBASIC1.58□□□□□ -2.16
SMC4Q9NTJ3 MIR3664-201ENST00000579074 99 ntBASIC1.58□□□□□ -2.16
SMC4Q9NTJ3 MIR376A1-201ENST00000616574 68 ntBASIC1.58□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.64-201ENST00000362845 102 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.210-201ENST00000364161 110 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.310-201ENST00000365063 113 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 SNORA63.7-201ENST00000365579 123 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.383-201ENST00000383855 97 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 RNU6-21P-201ENST00000384710 107 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 RNU6-855P-201ENST00000410395 104 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 RPL21P38-201ENST00000418090 167 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 LINC01399-202ENST00000458450 244 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 RNU6-496P-201ENST00000516145 99 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 RNA5SP168-201ENST00000516642 112 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 Y_RNA.721-201ENST00000517207 102 ntBASIC1.57□□□□□ -2.16
SMC4Q9NTJ3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 217.1 ms