Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC127455.1-201ENST00000565496 145 ntBASIC1.9□□□□□ -2.11
NECTIN3Q9NQS3 AL078604.3-201ENST00000615580 211 ntBASIC1.9□□□□□ -2.11
NECTIN3Q9NQS3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.9□□□□□ -2.11
NECTIN3Q9NQS3 snoU18.1-201ENST00000629629 71 ntBASIC1.9□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.14-201ENST00000362415 103 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 SNORD114-1-201ENST00000362705 72 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 RNU6-740P-201ENST00000364734 105 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.452-201ENST00000384202 108 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 MIR548H3-201ENST00000408771 118 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 JTBP1-201ENST00000441314 247 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 AC062037.2-201ENST00000610137 73 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 AC021506.2-201ENST00000612354 169 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 AC013791.1-201ENST00000616619 62 ntBASIC1.89□□□□□ -2.11
NECTIN3Q9NQS3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 AC092881.1-201ENST00000638218 2733 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.217-201ENST00000364214 105 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 RNU4-41P-201ENST00000364426 143 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.352-201ENST00000365439 102 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.477-201ENST00000384352 108 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 MIR30A-201ENST00000385092 71 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 AL603910.2-201ENST00000407268 136 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.590-201ENST00000410140 107 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.641-201ENST00000459414 105 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.637-201ENST00000459424 114 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 AC005357.1-201ENST00000588399 301 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 AC012493.3-201ENST00000604494 112 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 JPX_2.1-201ENST00000614161 69 ntBASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NECTIN3Q9NQS3 MIR126-201ENST00000362291 85 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.193-201ENST00000363979 102 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.277-201ENST00000364754 102 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 RNU6-203P-201ENST00000384038 104 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 HMGN2P23-201ENST00000456759 269 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 snoU13.9-201ENST00000458927 103 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 snoU13.15-201ENST00000459407 104 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 RNU6-437P-201ENST00000459408 95 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 UBL5P3-201ENST00000475112 231 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.668-201ENST00000516233 93 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 MIR5692C2-201ENST00000577959 77 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 AC073349.3-201ENST00000617616 186 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 AC095038.3-201ENST00000634439 195 ntBASIC1.87□□□□□ -2.11
NECTIN3Q9NQS3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 SNORD27-201ENST00000363981 72 ntBASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.518-201ENST00000384552 113 ntBASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 PGBD4P5-201ENST00000445958 426 ntBASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 AC099513.1-201ENST00000490423 301 ntBASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 OR9P1P-201ENST00000496431 281 ntBASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 AC004817.2-201ENST00000561794 651 ntBASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 AL008718.3-201ENST00000610217 321 ntBASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 AL591926.4-201ENST00000616895 298 ntBASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 SNORD3E-202ENST00000627253 216 ntBASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.86□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.350-201ENST00000365409 98 ntBASIC1.85□□□□□ -2.11
NECTIN3Q9NQS3 RNU6-211P-201ENST00000384047 107 ntBASIC1.85□□□□□ -2.11
NECTIN3Q9NQS3 CALM2P4-201ENST00000430810 426 ntBASIC1.85□□□□□ -2.11
NECTIN3Q9NQS3 snoU13.26-201ENST00000459452 105 ntBASIC1.85□□□□□ -2.11
NECTIN3Q9NQS3 HMGN1P7-201ENST00000491722 313 ntBASIC1.85□□□□□ -2.11
NECTIN3Q9NQS3 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
NECTIN3Q9NQS3 MIR367-201ENST00000362299 68 ntBASIC1.84□□□□□ -2.11
NECTIN3Q9NQS3 RNU6-144P-201ENST00000383951 107 ntBASIC1.84□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.416-201ENST00000384014 113 ntBASIC1.84□□□□□ -2.11
NECTIN3Q9NQS3 SNRPGP10-201ENST00000432323 225 ntBASIC1.84□□□□□ -2.11
NECTIN3Q9NQS3 Z98949.2-201ENST00000440996 144 ntBASIC1.84□□□□□ -2.11
NECTIN3Q9NQS3 RNA5SP168-201ENST00000516642 112 ntBASIC1.84□□□□□ -2.11
NECTIN3Q9NQS3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.84□□□□□ -2.11
NECTIN3Q9NQS3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.84□□□□□ -2.11
NECTIN3Q9NQS3 MIR2681-201ENST00000581814 105 ntBASIC1.84□□□□□ -2.11
NECTIN3Q9NQS3 AL513423.1-201ENST00000621695 132 ntBASIC1.84□□□□□ -2.11
NECTIN3Q9NQS3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
NECTIN3Q9NQS3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
NECTIN3Q9NQS3 ICE2P2-201ENST00000483823 2787 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 MIR424-201ENST00000362227 98 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 RNA5SP259-201ENST00000365541 109 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 RNU6-163P-201ENST00000384396 106 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 SNORA12.1-201ENST00000390873 148 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 RNU6-131P-201ENST00000391144 107 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 U8.16-201ENST00000391279 133 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 AC004965.1-201ENST00000413033 213 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 HSPE1P24-201ENST00000450782 238 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 AC005908.1-201ENST00000468701 347 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 RNU7-12P-201ENST00000516030 62 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 SUMO2P16-201ENST00000519475 264 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 DEFB122-202ENST00000569013 197 ntBASIC1.83□□□□□ -2.12
NECTIN3Q9NQS3 MIR4724-201ENST00000579485 89 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms