Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MIR8070-201ENST00000616510 88 ntBASIC1.79□□□□□ -2.12
DDX4Q9NQI0 AL391987.6-201ENST00000305671 199 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 Y_RNA.288-201ENST00000364854 92 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 Y_RNA.310-201ENST00000365063 113 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 RNU6-472P-201ENST00000384299 107 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 RPS20P10-201ENST00000451209 253 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 RNU7-116P-201ENST00000516940 62 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 RNU6-341P-201ENST00000516973 96 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 AL358944.1-201ENST00000528537 144 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 AC005972.2-201ENST00000604690 348 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 AC004832.4-201ENST00000608952 331 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 U4.1-201ENST00000620349 87 ntBASIC1.78□□□□□ -2.12
DDX4Q9NQI0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.78□□□□□ -2.12
DDX4Q9NQI0 MIR126-201ENST00000362291 85 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.16-201ENST00000362421 102 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.144-201ENST00000363521 113 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.483-201ENST00000384380 101 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 SNORD116-13-201ENST00000384408 92 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 AL354695.1-201ENST00000427935 228 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 AC245047.3-201ENST00000429428 127 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 FTH1P12-201ENST00000432137 551 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 U8.19-201ENST00000459095 133 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 SNORA31.24-201ENST00000517232 57 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 AC136628.3-201ENST00000521868 290 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 DEFB108E-201ENST00000524692 240 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 AC022254.1-201ENST00000567857 235 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 MIR4421-201ENST00000578133 69 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 AC091178.2-201ENST00000584401 117 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 AL078604.3-201ENST00000615580 211 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 7SK.10-201ENST00000621414 298 ntBASIC1.77□□□□□ -2.13
DDX4Q9NQI0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
DDX4Q9NQI0 UBE2WP1-201ENST00000362030 340 ntBASIC1.76□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.396-201ENST00000383949 103 ntBASIC1.76□□□□□ -2.13
DDX4Q9NQI0 RNU6-463P-201ENST00000384340 107 ntBASIC1.76□□□□□ -2.13
DDX4Q9NQI0 MIR568-201ENST00000385036 95 ntBASIC1.76□□□□□ -2.13
DDX4Q9NQI0 MT-TW-201ENST00000387382 68 ntBASIC1.76□□□□□ -2.13
DDX4Q9NQI0 AC009474.2-201ENST00000451383 136 ntBASIC1.76□□□□□ -2.13
DDX4Q9NQI0 AC091021.1-201ENST00000468051 388 ntBASIC1.76□□□□□ -2.13
DDX4Q9NQI0 AC091959.1-201ENST00000495857 238 ntBASIC1.76□□□□□ -2.13
DDX4Q9NQI0 RNU6-63P-201ENST00000516690 95 ntBASIC1.76□□□□□ -2.13
DDX4Q9NQI0 SNORA31.17-201ENST00000516953 127 ntBASIC1.76□□□□□ -2.13
DDX4Q9NQI0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.76□□□□□ -2.13
DDX4Q9NQI0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.76□□□□□ -2.13
DDX4Q9NQI0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.76□□□□□ -2.13
DDX4Q9NQI0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.76□□□□□ -2.13
DDX4Q9NQI0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
DDX4Q9NQI0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
DDX4Q9NQI0 RNY1P10-201ENST00000363268 113 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 SNORA7.1-201ENST00000363750 139 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.237-201ENST00000364439 102 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 RNU6-1323P-201ENST00000384025 107 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.452-201ENST00000384202 108 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 RNU6-360P-201ENST00000390944 104 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 RNA5SP511-201ENST00000410487 115 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 RPS27P1-201ENST00000450552 247 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.75□□□□□ -2.13
DDX4Q9NQI0 RNU6-970P-201ENST00000516312 107 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 SNORA27.4-201ENST00000516650 95 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 RNU6-1096P-201ENST00000517089 102 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 RNA5SP437-201ENST00000517249 129 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 AP002004.2-201ENST00000531656 154 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 MIR3198-2-201ENST00000577868 80 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.75□□□□□ -2.13
DDX4Q9NQI0 AL162424.1-201ENST00000602325 221 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 AC022217.4-201ENST00000604389 163 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 U2.14-201ENST00000615943 113 ntBASIC1.75□□□□□ -2.13
DDX4Q9NQI0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.75□□□□□ -2.13
DDX4Q9NQI0 ZNF209P-201ENST00000593450 2304 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
DDX4Q9NQI0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.44-201ENST00000362676 108 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.193-201ENST00000363979 102 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 RNU6-702P-201ENST00000364982 107 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 SNORA72.4-201ENST00000384174 132 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 RNA5SP109-201ENST00000391010 116 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 MIR1304-201ENST00000408243 91 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 MIR548H3-201ENST00000408771 118 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 RN7SKP200-201ENST00000410564 320 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 COX6CP10-201ENST00000416832 224 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 snoU13.27-201ENST00000459278 104 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.668-201ENST00000516233 93 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 RNU7-28P-201ENST00000516759 62 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 SCARNA24.2-201ENST00000516968 130 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 AC004817.2-201ENST00000561794 651 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 SNORA28-201ENST00000606769 126 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 AC100821.1-201ENST00000523153 2479 ntBASIC1.74□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.73□□□□□ -2.13
DDX4Q9NQI0 Y_RNA.352-201ENST00000365439 102 ntBASIC1.73□□□□□ -2.13
DDX4Q9NQI0 SNORA72-201ENST00000384339 132 ntBASIC1.73□□□□□ -2.13
DDX4Q9NQI0 MIR30A-201ENST00000385092 71 ntBASIC1.73□□□□□ -2.13
DDX4Q9NQI0 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
DDX4Q9NQI0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.73□□□□□ -2.13
DDX4Q9NQI0 HSPE1P9-201ENST00000440046 311 ntBASIC1.73□□□□□ -2.13
DDX4Q9NQI0 RPS4XP11-201ENST00000446897 772 ntBASIC1.73□□□□□ -2.13
DDX4Q9NQI0 RNU2-56P-201ENST00000516826 190 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms