Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MIR660-201ENST00000385235 97 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 RNU6-823P-201ENST00000391042 103 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 MIR873-201ENST00000401120 77 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 AL031003.1-201ENST00000404229 172 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 MTCYBP6-201ENST00000441810 138 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.19□□□□□ -2.22
HPS4Q9NQG7 AC010655.3-201ENST00000478818 450 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 RN7SKP88-201ENST00000516847 250 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.19□□□□□ -2.22
HPS4Q9NQG7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.19□□□□□ -2.22
HPS4Q9NQG7 MIR4423-201ENST00000580922 80 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 AL121655.1-201ENST00000605811 308 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 7SK.8-201ENST00000612110 250 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 7SK.11-201ENST00000615477 250 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 MIR8065-201ENST00000620577 100 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 7SK.13-201ENST00000622040 250 ntBASIC1.19□□□□□ -2.22
HPS4Q9NQG7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.18□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.143-201ENST00000363520 106 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 RNU4-50P-201ENST00000364361 141 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 RNU6-117P-201ENST00000365415 107 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.424-201ENST00000384063 103 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 RNU6-505P-201ENST00000384427 107 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 RNU4-30P-201ENST00000410245 143 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.18□□□□□ -2.22
HPS4Q9NQG7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.18□□□□□ -2.22
HPS4Q9NQG7 AC092991.1-201ENST00000477176 376 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 RPS23P4-201ENST00000487908 423 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 RNU6-397P-201ENST00000516226 104 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 RNU6-341P-201ENST00000516973 96 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 RNU6-988P-201ENST00000519081 107 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 AC011604.1-201ENST00000545978 196 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 AC136932.1-201ENST00000574771 208 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 AL078603.1-201ENST00000603824 313 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 AC124312.5-201ENST00000604451 268 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 AC022441.3-201ENST00000605737 136 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.772-201ENST00000606692 102 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 AC106754.2-201ENST00000623006 233 ntBASIC1.18□□□□□ -2.22
HPS4Q9NQG7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HPS4Q9NQG7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
HPS4Q9NQG7 AL391516.1-201ENST00000554380 2449 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.172-201ENST00000363765 102 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 RNU6-324P-201ENST00000363957 106 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.230-201ENST00000364348 109 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.439-201ENST00000384119 94 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 SNORD116-13-201ENST00000384408 92 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 RNU6-376P-201ENST00000384731 106 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 MIR562-201ENST00000384894 95 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 U8.20-201ENST00000459445 131 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 RNU6-436P-201ENST00000516171 114 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 RNU6-1046P-201ENST00000516538 107 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 RNA5SP168-201ENST00000516642 112 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 RNU6-1137P-201ENST00000517073 99 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.715-201ENST00000517082 110 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 MIR4778-201ENST00000577635 80 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 AL356055.1-201ENST00000602528 446 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 AC006380.1-201ENST00000603598 186 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 RAC1P9-201ENST00000604990 392 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 AC022140.2-201ENST00000623500 188 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 AC127459.3-201ENST00000624328 466 ntBASIC1.17□□□□□ -2.22
HPS4Q9NQG7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
HPS4Q9NQG7 SNORD81.1-201ENST00000363064 77 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 RNU4-76P-201ENST00000364509 141 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 RNU6-42P-201ENST00000384165 107 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.526-201ENST00000384572 110 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.527-201ENST00000384573 102 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 RNU6-136P-201ENST00000384663 107 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 MIR222-201ENST00000384992 110 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 RPS29P1-201ENST00000465274 159 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 RNU6-1278P-201ENST00000516130 107 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 RNA5SP220-201ENST00000516298 104 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 RNU6-1337P-201ENST00000516525 95 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 RNU2-56P-201ENST00000516826 190 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 FAM106DP-201ENST00000586416 501 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 AC044792.1-201ENST00000593294 196 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 AC068647.2-201ENST00000637380 353 ntBASIC1.16□□□□□ -2.22
HPS4Q9NQG7 Y_RNA.11-201ENST00000362375 109 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 SNORA1B-201ENST00000362535 133 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 Y_RNA.105-201ENST00000363182 111 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 Y_RNA.286-201ENST00000364813 102 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 Y_RNA.329-201ENST00000365209 107 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 Y_RNA.331-201ENST00000365267 102 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 Y_RNA.389-201ENST00000383924 113 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 RNU6-424P-201ENST00000384367 105 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 U8.16-201ENST00000391279 133 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 RNU2-61P-201ENST00000411069 191 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 CALM2P4-201ENST00000430810 426 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 DYNLT3P2-201ENST00000442517 295 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 SUMO1P2-201ENST00000452524 304 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 OR9P1P-201ENST00000496431 281 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 RNU6-1291P-201ENST00000516591 104 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 RNU7-28P-201ENST00000516759 62 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 RNU7-110P-201ENST00000516891 62 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 RNU6-165P-201ENST00000517170 99 ntBASIC1.15□□□□□ -2.23
HPS4Q9NQG7 MIR3145-201ENST00000580727 82 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms