Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AL034345.1-201ENST00000407768 123 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 RNU2-38P-201ENST00000410856 79 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.65□□□□□ -2.15
HINT3Q9NQE9 AL049830.1-201ENST00000468034 425 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.668-201ENST00000516233 93 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 RNU7-28P-201ENST00000516759 62 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 AC127455.1-201ENST00000565496 145 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 AC012433.1-201ENST00000588916 398 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 AL162424.1-201ENST00000602325 221 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 AC012493.3-201ENST00000604494 112 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 SNORA28-201ENST00000606769 126 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 U2.14-201ENST00000615943 113 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.65□□□□□ -2.15
HINT3Q9NQE9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HINT3Q9NQE9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HINT3Q9NQE9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.275-201ENST00000364726 110 ntBASIC1.64□□□□□ -2.15
HINT3Q9NQE9 MTCO2P33-201ENST00000402100 465 ntBASIC1.64□□□□□ -2.15
HINT3Q9NQE9 MIR1289-2-201ENST00000408360 111 ntBASIC1.64□□□□□ -2.15
HINT3Q9NQE9 JTBP1-201ENST00000441314 247 ntBASIC1.64□□□□□ -2.15
HINT3Q9NQE9 U8.19-201ENST00000459095 133 ntBASIC1.64□□□□□ -2.15
HINT3Q9NQE9 AC099513.1-201ENST00000490423 301 ntBASIC1.64□□□□□ -2.15
HINT3Q9NQE9 RPL23AP54-201ENST00000495129 419 ntBASIC1.64□□□□□ -2.15
HINT3Q9NQE9 RNA5SP182-201ENST00000516064 82 ntBASIC1.64□□□□□ -2.15
HINT3Q9NQE9 AC021506.2-201ENST00000612354 169 ntBASIC1.64□□□□□ -2.15
HINT3Q9NQE9 MIR8074-201ENST00000615081 81 ntBASIC1.64□□□□□ -2.15
HINT3Q9NQE9 MIR6715A-201ENST00000615929 79 ntBASIC1.64□□□□□ -2.15
HINT3Q9NQE9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HINT3Q9NQE9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.63□□□□□ -2.15
HINT3Q9NQE9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
HINT3Q9NQE9 RNU6-899P-201ENST00000363947 107 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 RNU4-41P-201ENST00000364426 143 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 SNORD48-201ENST00000364953 64 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 RNU6-203P-201ENST00000384038 104 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.452-201ENST00000384202 108 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 RNA5SP482-201ENST00000391269 118 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.63□□□□□ -2.15
HINT3Q9NQE9 RNU6-1132P-201ENST00000459214 107 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 OR9P1P-201ENST00000496431 281 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 AC024614.2-201ENST00000577584 372 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 MIR3149-201ENST00000584629 83 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 snoU18.1-201ENST00000629629 71 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 AC095038.3-201ENST00000634439 195 ntBASIC1.63□□□□□ -2.15
HINT3Q9NQE9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.14-201ENST00000362415 103 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.117-201ENST00000363294 101 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 RNU6-740P-201ENST00000364734 105 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 RNU6-702P-201ENST00000364982 107 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 RNU6-1289P-201ENST00000384431 106 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 MIR1267-201ENST00000408723 78 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 SNORA36B-201ENST00000410438 131 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 AL161935.2-201ENST00000414627 60 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 BTF3P11-201ENST00000426582 477 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.62□□□□□ -2.15
HINT3Q9NQE9 HMGN2P23-201ENST00000456759 269 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.62□□□□□ -2.15
HINT3Q9NQE9 AC110588.1-201ENST00000559699 137 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 SNORA77B-201ENST00000578179 125 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 AC005357.1-201ENST00000588399 301 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 AC013791.1-201ENST00000616619 62 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 MIR7843-201ENST00000622274 79 ntBASIC1.62□□□□□ -2.15
HINT3Q9NQE9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.62□□□□□ -2.15
HINT3Q9NQE9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.193-201ENST00000363979 102 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.352-201ENST00000365439 102 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.562-201ENST00000384695 113 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 MIR194-1-201ENST00000384892 85 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 MIR30A-201ENST00000385092 71 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 U8.13-201ENST00000390842 128 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 SNORA40.18-201ENST00000391200 128 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 Z98949.2-201ENST00000440996 144 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 RPS29P11-201ENST00000496507 171 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 RNU6-295P-201ENST00000516901 104 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 SNORA44.1-201ENST00000517031 108 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 AC062037.2-201ENST00000610137 73 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 AL008718.3-201ENST00000610217 321 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 AL591926.4-201ENST00000616895 298 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 AC073349.3-201ENST00000617616 186 ntBASIC1.61□□□□□ -2.15
HINT3Q9NQE9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
HINT3Q9NQE9 RNU6-1205P-201ENST00000363625 106 ntBASIC1.6□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.203-201ENST00000364106 102 ntBASIC1.6□□□□□ -2.15
HINT3Q9NQE9 Y_RNA.253-201ENST00000364562 112 ntBASIC1.6□□□□□ -2.15
HINT3Q9NQE9 AL603910.2-201ENST00000407268 136 ntBASIC1.6□□□□□ -2.15
HINT3Q9NQE9 RNU6-437P-201ENST00000459408 95 ntBASIC1.6□□□□□ -2.15
HINT3Q9NQE9 RPL39P38-201ENST00000467018 153 ntBASIC1.6□□□□□ -2.15
HINT3Q9NQE9 AC107393.1-201ENST00000512403 346 ntBASIC1.6□□□□□ -2.15
HINT3Q9NQE9 MIR5692C2-201ENST00000577959 77 ntBASIC1.6□□□□□ -2.15
HINT3Q9NQE9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
HINT3Q9NQE9 AC068700.1-201ENST00000565862 3754 ntBASIC1.59□□□□□ -2.15
HINT3Q9NQE9 RNU6-211P-201ENST00000384047 107 ntBASIC1.59□□□□□ -2.15
HINT3Q9NQE9 MIR548H3-201ENST00000408771 118 ntBASIC1.59□□□□□ -2.15
HINT3Q9NQE9 RNU6-651P-201ENST00000411040 105 ntBASIC1.59□□□□□ -2.15
HINT3Q9NQE9 AC004965.1-201ENST00000413033 213 ntBASIC1.59□□□□□ -2.15
HINT3Q9NQE9 CALM2P4-201ENST00000430810 426 ntBASIC1.59□□□□□ -2.15
HINT3Q9NQE9 AC005908.1-201ENST00000468701 347 ntBASIC1.59□□□□□ -2.15
HINT3Q9NQE9 RNA5SP168-201ENST00000516642 112 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms