Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 Y_RNA.599-201ENST00000410489 109 ntBASIC0.57□□□□□ -2.32
EXOSC4Q9NPD3 FCF1P4-201ENST00000448326 183 ntBASIC0.57□□□□□ -2.32
EXOSC4Q9NPD3 SNORD45.4-201ENST00000516629 73 ntBASIC0.57□□□□□ -2.32
EXOSC4Q9NPD3 SNORA74.3-201ENST00000517108 154 ntBASIC0.57□□□□□ -2.32
EXOSC4Q9NPD3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.57□□□□□ -2.32
EXOSC4Q9NPD3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.57□□□□□ -2.32
EXOSC4Q9NPD3 MIR5690-201ENST00000583739 73 ntBASIC0.57□□□□□ -2.32
EXOSC4Q9NPD3 MIR4762-201ENST00000585261 75 ntBASIC0.57□□□□□ -2.32
EXOSC4Q9NPD3 AL590095.2-201ENST00000604136 117 ntBASIC0.57□□□□□ -2.32
EXOSC4Q9NPD3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
EXOSC4Q9NPD3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
EXOSC4Q9NPD3 MIR103A2-201ENST00000362154 78 ntBASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 MIR136-201ENST00000385207 82 ntBASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 AL035398.1-201ENST00000430869 322 ntBASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 SNRPGP10-201ENST00000432323 225 ntBASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 CHEK2P4-201ENST00000450340 246 ntBASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 PRDX4P1-201ENST00000507189 574 ntBASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 AC144568.1-201ENST00000520139 137 ntBASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 MTND4LP32-201ENST00000636111 270 ntBASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
EXOSC4Q9NPD3 Y_RNA.166-201ENST00000363730 102 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 RNU1-93P-201ENST00000364704 169 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 Y_RNA.474-201ENST00000384341 102 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 RNY3P4-201ENST00000384428 101 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 MIR508-201ENST00000384857 115 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 MTND1P2-201ENST00000430604 821 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 RNU6-559P-201ENST00000516151 98 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 RNU7-4P-201ENST00000516961 62 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 AP003716.2-201ENST00000528260 108 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 MIR4764-201ENST00000580680 88 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 AC131055.1-201ENST00000584626 316 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 AC005972.2-201ENST00000604690 348 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 U2.1-201ENST00000618978 145 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 AC138305.3-201ENST00000624988 240 ntBASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.55□□□□□ -2.32
EXOSC4Q9NPD3 RNA5SP432-201ENST00000362480 116 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 Y_RNA.146-201ENST00000363549 102 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 SNORD14.1-201ENST00000365609 90 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 AC117470.1-201ENST00000381974 330 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 SNORD89-201ENST00000390981 114 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 SNORD78.2-201ENST00000391076 69 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 Y_RNA.619-201ENST00000410951 90 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 MTCO2P27-201ENST00000420740 428 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 AC109810.1-201ENST00000534066 224 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 AC133485.1-201ENST00000567176 124 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 AC138907.6-201ENST00000568401 126 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 AC022306.2-201ENST00000617563 647 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 SEPT14P17-201ENST00000617978 177 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 U6.92-201ENST00000636464 89 ntBASIC0.54□□□□□ -2.32
EXOSC4Q9NPD3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 MIR559-201ENST00000385188 96 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 Y_RNA.653-201ENST00000459091 95 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 SNORD123-201ENST00000459473 70 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 RNU6-699P-201ENST00000517081 110 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 MIR3124-201ENST00000582636 67 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 AC136443.5-201ENST00000603741 370 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 AC022441.3-201ENST00000605737 136 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 RNU6-94P-201ENST00000607728 107 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 AC104465.1-201ENST00000611365 139 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 AC092794.1-201ENST00000612734 582 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 U6atac.1-201ENST00000616025 117 ntBASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.53□□□□□ -2.32
EXOSC4Q9NPD3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 RNU6-1175P-201ENST00000365200 107 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 SNORA72-201ENST00000384339 132 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 MIR628-201ENST00000385229 95 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 RNU6-131P-201ENST00000391144 107 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 RNU6-855P-201ENST00000410395 104 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 RNU6-733P-201ENST00000410759 104 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 FABP5P4-201ENST00000437203 171 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 Y_RNA.638-201ENST00000459374 113 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 RN7SKP164-201ENST00000516138 266 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 DEFB108E-201ENST00000524692 240 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 CYP3A137P-201ENST00000562436 69 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 AC113139.1-201ENST00000605049 239 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 7SK.10-201ENST00000621414 298 ntBASIC0.52□□□□□ -2.33
EXOSC4Q9NPD3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 RNU6-654P-201ENST00000364373 107 ntBASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 MIR570-201ENST00000384917 97 ntBASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 SNORD28B-201ENST00000390993 75 ntBASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 AL590004.1-201ENST00000405321 300 ntBASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 SNORD99-201ENST00000408612 74 ntBASIC0.51□□□□□ -2.33
EXOSC4Q9NPD3 MCFD2P1-201ENST00000417812 300 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms