Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU6-770P-201ENST00000363929 105 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.310-201ENST00000365063 113 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 SNORA72-201ENST00000384339 132 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 SNORD116-13-201ENST00000384408 92 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 MIR660-201ENST00000385235 97 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 SNORA12.1-201ENST00000390873 148 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 AC233266.1-201ENST00000454518 96 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 RNU1-98P-201ENST00000458992 160 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 AC079140.2-201ENST00000506193 142 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-496P-201ENST00000516145 99 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 AC242852.1-201ENST00000612151 96 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 AC244015.1-201ENST00000622301 99 ntBASIC1.58□□□□□ -2.16
POLR1BQ9H9Y6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.136-201ENST00000363444 102 ntBASIC1.57□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-392P-201ENST00000364926 101 ntBASIC1.57□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.57□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-1105P-201ENST00000384774 107 ntBASIC1.57□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.581-201ENST00000391017 97 ntBASIC1.57□□□□□ -2.16
POLR1BQ9H9Y6 AC027119.1-201ENST00000440877 241 ntBASIC1.57□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-1153P-201ENST00000516760 105 ntBASIC1.57□□□□□ -2.16
POLR1BQ9H9Y6 AC011604.1-201ENST00000545978 196 ntBASIC1.57□□□□□ -2.16
POLR1BQ9H9Y6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
POLR1BQ9H9Y6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.172-201ENST00000363765 102 ntBASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 RNU1-42P-201ENST00000364033 160 ntBASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.214-201ENST00000364201 112 ntBASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-424P-201ENST00000384367 105 ntBASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-902P-201ENST00000517212 91 ntBASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 AL645939.4-201ENST00000604495 135 ntBASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 SNORD3E-202ENST00000627253 216 ntBASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
POLR1BQ9H9Y6 SNORA63-201ENST00000363450 132 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-60P-201ENST00000364792 103 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.286-201ENST00000364813 102 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-1011P-201ENST00000384668 107 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 ELOCP20-201ENST00000422460 345 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 HSPE1P25-201ENST00000455484 251 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 snoU13.18-201ENST00000459483 104 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 RNA5SP168-201ENST00000516642 112 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 AC136628.3-201ENST00000521868 290 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 AC006504.6-201ENST00000590142 199 ntBASIC1.55□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.210-201ENST00000364161 110 ntBASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 RNU4-41P-201ENST00000364426 143 ntBASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 SNORA67.6-201ENST00000391093 99 ntBASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.621-201ENST00000411065 96 ntBASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 SNX2P2-201ENST00000424553 323 ntBASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 LINC01399-202ENST00000458450 244 ntBASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 AC010655.3-201ENST00000478818 450 ntBASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 RNY3P15-201ENST00000516297 97 ntBASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 AP003072.1-201ENST00000531740 145 ntBASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 AP003357.1-201ENST00000604497 148 ntBASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.19-201ENST00000362462 99 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.153-201ENST00000363615 91 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 SNORA7.1-201ENST00000363750 139 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 U8.5-201ENST00000364528 136 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.326-201ENST00000365176 113 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-290P-201ENST00000365212 101 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 RNA5SP259-201ENST00000365541 109 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.569-201ENST00000384749 103 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 MIR489-201ENST00000384923 84 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 MIR1276-201ENST00000408707 83 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.602-201ENST00000410535 92 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 CALM2P4-201ENST00000430810 426 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 Z98949.2-201ENST00000440996 144 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 AL731563.1-201ENST00000442202 214 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-1137P-201ENST00000517073 99 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 MIR4762-201ENST00000585261 75 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.812-201ENST00000610788 101 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 MIR6504-201ENST00000613520 61 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.784-201ENST00000613803 101 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.787-201ENST00000616522 101 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.780-201ENST00000617336 101 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 Y_RNA.801-201ENST00000619005 101 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 AC027279.3-201ENST00000625055 122 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 AC068647.2-201ENST00000637380 353 ntBASIC1.53□□□□□ -2.16
POLR1BQ9H9Y6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.52□□□□□ -2.17
POLR1BQ9H9Y6 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
POLR1BQ9H9Y6 SNORA53-201ENST00000391141 249 ntBASIC1.52□□□□□ -2.17
POLR1BQ9H9Y6 U8.16-201ENST00000391279 133 ntBASIC1.52□□□□□ -2.17
POLR1BQ9H9Y6 AL590004.1-201ENST00000405321 300 ntBASIC1.52□□□□□ -2.17
POLR1BQ9H9Y6 RNU6-121P-201ENST00000410525 99 ntBASIC1.52□□□□□ -2.17
POLR1BQ9H9Y6 RPL39P38-201ENST00000467018 153 ntBASIC1.52□□□□□ -2.17
POLR1BQ9H9Y6 MRPS35P2-201ENST00000508242 191 ntBASIC1.52□□□□□ -2.17
POLR1BQ9H9Y6 SUMO2P16-201ENST00000519475 264 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms