Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL356280.1-201ENST00000603614 379 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 MIR3670-4-201ENST00000612260 65 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 AC096644.4-201ENST00000563417 2912 ntBASIC2.48□□□□□ -2.01
SEC61A2Q9H9S3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 MIR26A1-201ENST00000362205 77 ntBASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 RNU6-1298P-201ENST00000362456 101 ntBASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 SNORD61-201ENST00000384252 73 ntBASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 RNU6-220P-201ENST00000390919 107 ntBASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 MIR891A-201ENST00000401237 79 ntBASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 Y_RNA.617-201ENST00000410920 90 ntBASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 Y_RNA.651-201ENST00000459380 103 ntBASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 AC003982.1-202ENST00000469928 248 ntBASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 AC018868.1-201ENST00000491307 315 ntBASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 Y_RNA.666-201ENST00000516187 112 ntBASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 AL365205.2-201ENST00000594586 68 ntBASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SEC61A2Q9H9S3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.46□□□□□ -2.01
SEC61A2Q9H9S3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 MIR126-201ENST00000362291 85 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 SNORD114-6-201ENST00000364393 72 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 RNU6-147P-201ENST00000383983 107 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 MIR561-201ENST00000385216 97 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 MIR1263-201ENST00000408324 86 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 AC063976.4-201ENST00000421971 163 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 RN7SKP19-201ENST00000516016 252 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 MIR3605-201ENST00000583214 100 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 AL359075.3-201ENST00000613288 217 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 MIR6079-201ENST00000635807 62 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 MIR338-201ENST00000636369 67 ntBASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SEC61A2Q9H9S3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 RNU6-755P-201ENST00000364400 103 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 RNA5SP125-201ENST00000364843 120 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 AL117342.1-201ENST00000404861 406 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 AF228730.3-201ENST00000436691 102 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 RNU6-126P-201ENST00000516685 103 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 RNU6-56P-201ENST00000516986 93 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 IGKV1-22-201ENST00000524313 326 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 MIR4679-2-201ENST00000578358 77 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 AC025166.1-201ENST00000612411 163 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 MIR7106-201ENST00000612419 65 ntBASIC2.45□□□□□ -2.02
SEC61A2Q9H9S3 AC008555.8-201ENST00000623602 2168 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 RNA5SP323-201ENST00000391094 133 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 AC018634.1-201ENST00000437554 401 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 AL021397.1-201ENST00000451806 248 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 Y_RNA.649-201ENST00000459077 103 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 RNU6-693P-201ENST00000516134 107 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 RNA5SP367-201ENST00000516557 118 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 RNU1-142P-201ENST00000516682 145 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 GTF3AP2-201ENST00000557014 266 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 AC008507.4-201ENST00000585464 127 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 AL591926.4-201ENST00000616895 298 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 U6.108-201ENST00000637764 58 ntBASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SEC61A2Q9H9S3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 MTND5P18-201ENST00000445624 1801 ntBASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 RNU1-112P-201ENST00000364401 164 ntBASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 SNORA25B-201ENST00000365507 128 ntBASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 SNORA8-201ENST00000384574 139 ntBASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 AC087499.2-201ENST00000432861 149 ntBASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 AC105272.1-201ENST00000438604 198 ntBASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 MTATP6P21-201ENST00000440681 189 ntBASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 RNA5SP170-201ENST00000517150 101 ntBASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 AC018630.2-201ENST00000534866 2403 ntBASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 ZNF271P-202ENST00000465539 1970 ntBASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.43□□□□□ -2.02
SEC61A2Q9H9S3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 SNORA1B-201ENST00000362535 133 ntBASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 SNORA25.6-201ENST00000364121 118 ntBASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 Y_RNA.346-201ENST00000365385 112 ntBASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 RNU6-443P-201ENST00000384780 107 ntBASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 AL049830.1-201ENST00000468034 425 ntBASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 TRBV12-1-201ENST00000479785 344 ntBASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 RNU6-1149P-201ENST00000516810 97 ntBASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 RNU6-341P-201ENST00000516973 96 ntBASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms