Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 U1.36-201ENST00000620684 176 ntBASIC2.03□□□□□ -2.08
CDCP1Q9H5V8 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
CDCP1Q9H5V8 AC012640.5-201ENST00000623897 319 ntBASIC2.03□□□□□ -2.08
CDCP1Q9H5V8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.03□□□□□ -2.08
CDCP1Q9H5V8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 AC018630.2-201ENST00000534866 2403 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 Y_RNA.398-201ENST00000383952 99 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 SNORA67.3-201ENST00000384366 140 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 SNORA64-201ENST00000384674 134 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 RNU2-2P-201ENST00000410396 191 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 RNU6-1135P-201ENST00000411083 103 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 AC069257.2-201ENST00000441819 155 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 RNU7-94P-201ENST00000459576 63 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 RNA5SP200-201ENST00000516360 103 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 RNU7-115P-201ENST00000516433 55 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 RNU6-1096P-201ENST00000517089 102 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 AC084364.2-201ENST00000546924 395 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 MIR3144-201ENST00000579460 79 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 POLR3GP1-201ENST00000594073 261 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 RNU2-4P-201ENST00000606190 192 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 AC009831.4-201ENST00000620744 325 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 MIR6079-201ENST00000635807 62 ntBASIC2.02□□□□□ -2.09
CDCP1Q9H5V8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 Y_RNA.572-201ENST00000384757 98 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 AL355497.1-201ENST00000406262 551 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 RNU6-394P-201ENST00000410735 107 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 RNU5E-9P-201ENST00000411164 104 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 AC245047.4-201ENST00000433189 144 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 AL606517.2-201ENST00000442855 241 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 RPS4XP11-201ENST00000446897 772 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 snoU13.26-201ENST00000459452 105 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 AC127455.1-201ENST00000565496 145 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 MIR5692C2-201ENST00000577959 77 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 AC091178.2-201ENST00000584401 117 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 AC104984.5-201ENST00000586878 94 ntBASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.01□□□□□ -2.09
CDCP1Q9H5V8 MIRLET7G-201ENST00000362280 84 ntBASIC2□□□□□ -2.09
CDCP1Q9H5V8 RNU6-1205P-201ENST00000363625 106 ntBASIC2□□□□□ -2.09
CDCP1Q9H5V8 SNORA16B-201ENST00000364674 135 ntBASIC2□□□□□ -2.09
CDCP1Q9H5V8 SNORA72-201ENST00000384339 132 ntBASIC2□□□□□ -2.09
CDCP1Q9H5V8 Y_RNA.571-201ENST00000384753 98 ntBASIC2□□□□□ -2.09
CDCP1Q9H5V8 MIR562-201ENST00000384894 95 ntBASIC2□□□□□ -2.09
CDCP1Q9H5V8 snoU13.15-201ENST00000459407 104 ntBASIC2□□□□□ -2.09
CDCP1Q9H5V8 RNU7-200P-201ENST00000516105 62 ntBASIC2□□□□□ -2.09
CDCP1Q9H5V8 IGKV3-31-201ENST00000523109 329 ntBASIC2□□□□□ -2.09
CDCP1Q9H5V8 MIR6715A-201ENST00000615929 79 ntBASIC2□□□□□ -2.09
CDCP1Q9H5V8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CDCP1Q9H5V8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2□□□□□ -2.09
CDCP1Q9H5V8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 Y_RNA.267-201ENST00000364679 109 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 Y_RNA.293-201ENST00000364908 93 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 RNU6-1130P-201ENST00000365434 107 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 Y_RNA.412-201ENST00000384001 104 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 Y_RNA.435-201ENST00000384095 112 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 AL023284.1-201ENST00000403956 276 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 SNORA36B-201ENST00000410438 131 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 RPL23AP54-201ENST00000495129 419 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 RNU6-1291P-201ENST00000516591 104 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 SCARNA16.3-201ENST00000516595 184 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 RNU6-341P-201ENST00000516973 96 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 AC011604.1-201ENST00000545978 196 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 MIR5694-201ENST00000581190 76 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 AC022217.4-201ENST00000604389 163 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 MIR219B-201ENST00000637023 88 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
CDCP1Q9H5V8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 Y_RNA.182-201ENST00000363880 111 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 Y_RNA.238-201ENST00000364441 102 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 RNU6-818P-201ENST00000364837 108 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 RNU6-144P-201ENST00000383951 107 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 RNA5SP109-201ENST00000391010 116 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 Y_RNA.621-201ENST00000411065 96 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 AL606753.1-201ENST00000427435 87 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 AC233266.1-201ENST00000454518 96 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 SUB1P4-201ENST00000566062 339 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 AC242852.1-201ENST00000612151 96 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 AC244015.1-201ENST00000622301 99 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 AC100821.1-201ENST00000523153 2479 ntBASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDCP1Q9H5V8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CDCP1Q9H5V8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.97□□□□□ -2.09
CDCP1Q9H5V8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CDCP1Q9H5V8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CDCP1Q9H5V8 Y_RNA.7-201ENST00000362352 102 ntBASIC1.97□□□□□ -2.09
CDCP1Q9H5V8 snoU2_19.4-201ENST00000364329 80 ntBASIC1.97□□□□□ -2.09
CDCP1Q9H5V8 RNU4-17P-201ENST00000365598 141 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms