Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF39Q9H2S5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF39Q9H2S5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF39Q9H2S5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF39Q9H2S5 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF39Q9H2S5 RNU1-63P-201ENST00000383902 164 ntBASIC4.76□□□□□ -1.65
RNF39Q9H2S5 RNU6-1072P-201ENST00000384703 107 ntBASIC4.76□□□□□ -1.65
RNF39Q9H2S5 RNU6-443P-201ENST00000384780 107 ntBASIC4.76□□□□□ -1.65
RNF39Q9H2S5 MIR1193-201ENST00000408109 78 ntBASIC4.76□□□□□ -1.65
RNF39Q9H2S5 SNORD100-201ENST00000408573 76 ntBASIC4.76□□□□□ -1.65
RNF39Q9H2S5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF39Q9H2S5 RNA5SP445-201ENST00000515889 115 ntBASIC4.76□□□□□ -1.65
RNF39Q9H2S5 SNORA70.19-201ENST00000516717 90 ntBASIC4.76□□□□□ -1.65
RNF39Q9H2S5 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF39Q9H2S5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF39Q9H2S5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF39Q9H2S5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF39Q9H2S5 AC092435.3-201ENST00000565538 3654 ntBASIC4.76□□□□□ -1.65
RNF39Q9H2S5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF39Q9H2S5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RNF39Q9H2S5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF39Q9H2S5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF39Q9H2S5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RNF39Q9H2S5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF39Q9H2S5 AC007224.1-201ENST00000564410 144 ntBASIC4.75□□□□□ -1.65
RNF39Q9H2S5 AC091905.2-201ENST00000623143 306 ntBASIC4.75□□□□□ -1.65
RNF39Q9H2S5 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF39Q9H2S5 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RNF39Q9H2S5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF39Q9H2S5 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 RNA5SP493-201ENST00000364115 91 ntBASIC4.74□□□□□ -1.65
RNF39Q9H2S5 SNORA70C-201ENST00000384538 135 ntBASIC4.74□□□□□ -1.65
RNF39Q9H2S5 RNU6-1031P-201ENST00000384773 107 ntBASIC4.74□□□□□ -1.65
RNF39Q9H2S5 MIR563-201ENST00000385080 79 ntBASIC4.74□□□□□ -1.65
RNF39Q9H2S5 RPS26P2-201ENST00000440331 348 ntBASIC4.74□□□□□ -1.65
RNF39Q9H2S5 RNU7-24P-201ENST00000458867 62 ntBASIC4.74□□□□□ -1.65
RNF39Q9H2S5 RN7SL691P-201ENST00000494487 301 ntBASIC4.74□□□□□ -1.65
RNF39Q9H2S5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 MIR548H5-201ENST00000580314 60 ntBASIC4.74□□□□□ -1.65
RNF39Q9H2S5 MIR4251-201ENST00000635819 61 ntBASIC4.74□□□□□ -1.65
RNF39Q9H2S5 AC009093.8-201ENST00000641769 292 ntBASIC4.74□□□□□ -1.65
RNF39Q9H2S5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF39Q9H2S5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF39Q9H2S5 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF39Q9H2S5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF39Q9H2S5 RNA5SP28-201ENST00000363841 119 ntBASIC4.73□□□□□ -1.65
RNF39Q9H2S5 SNORD113-2-201ENST00000391082 72 ntBASIC4.73□□□□□ -1.65
RNF39Q9H2S5 RNA5SP252-201ENST00000391131 119 ntBASIC4.73□□□□□ -1.65
RNF39Q9H2S5 AC006539.3-201ENST00000454258 129 ntBASIC4.73□□□□□ -1.65
RNF39Q9H2S5 RNA5SP49-201ENST00000516450 115 ntBASIC4.73□□□□□ -1.65
RNF39Q9H2S5 MIR3160-1-201ENST00000577972 85 ntBASIC4.73□□□□□ -1.65
RNF39Q9H2S5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF39Q9H2S5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RNF39Q9H2S5 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
RNF39Q9H2S5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF39Q9H2S5 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF39Q9H2S5 AC092435.4-201ENST00000623012 4159 ntBASIC4.72□□□□□ -1.65
RNF39Q9H2S5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF39Q9H2S5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
RNF39Q9H2S5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF39Q9H2S5 RNU1-109P-201ENST00000383960 147 ntBASIC4.72□□□□□ -1.65
RNF39Q9H2S5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RNF39Q9H2S5 MIR921-201ENST00000401133 56 ntBASIC4.72□□□□□ -1.65
RNF39Q9H2S5 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RNF39Q9H2S5 AC244023.1-201ENST00000426884 112 ntBASIC4.72□□□□□ -1.65
RNF39Q9H2S5 AC108751.2-201ENST00000469993 231 ntBASIC4.72□□□□□ -1.65
RNF39Q9H2S5 SNORA25.16-201ENST00000516741 121 ntBASIC4.72□□□□□ -1.65
RNF39Q9H2S5 CYCSP30-201ENST00000546447 172 ntBASIC4.72□□□□□ -1.65
RNF39Q9H2S5 AC242498.1-201ENST00000604134 111 ntBASIC4.72□□□□□ -1.65
RNF39Q9H2S5 U6.103-201ENST00000637085 61 ntBASIC4.72□□□□□ -1.65
RNF39Q9H2S5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF39Q9H2S5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF39Q9H2S5 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF39Q9H2S5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF39Q9H2S5 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
RNF39Q9H2S5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF39Q9H2S5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.71□□□□□ -1.65
RNF39Q9H2S5 MIR101-2-201ENST00000362195 79 ntBASIC4.71□□□□□ -1.66
RNF39Q9H2S5 MIR383-201ENST00000362257 73 ntBASIC4.71□□□□□ -1.66
RNF39Q9H2S5 MIR561-201ENST00000385216 97 ntBASIC4.71□□□□□ -1.66
RNF39Q9H2S5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC4.71□□□□□ -1.66
RNF39Q9H2S5 RNA5SP38-201ENST00000410750 119 ntBASIC4.71□□□□□ -1.66
RNF39Q9H2S5 MIR514B-201ENST00000516774 80 ntBASIC4.71□□□□□ -1.66
RNF39Q9H2S5 RNU6-656P-201ENST00000516785 107 ntBASIC4.71□□□□□ -1.66
RNF39Q9H2S5 RN7SL600P-201ENST00000581811 299 ntBASIC4.71□□□□□ -1.66
RNF39Q9H2S5 ZYXP1-201ENST00000617638 118 ntBASIC4.71□□□□□ -1.66
RNF39Q9H2S5 MIR7157-201ENST00000635801 60 ntBASIC4.71□□□□□ -1.66
RNF39Q9H2S5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
RNF39Q9H2S5 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF39Q9H2S5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF39Q9H2S5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms