Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNA5SP276-201ENST00000362580 94 ntBASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 RNU6-859P-201ENST00000362728 107 ntBASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 SNORA4.2-201ENST00000365313 147 ntBASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 RNU6-886P-201ENST00000384319 105 ntBASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 PCNPP3-201ENST00000393579 471 ntBASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 RNU2-7P-201ENST00000410794 178 ntBASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 HSPE1P9-201ENST00000440046 311 ntBASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 SNORD11-201ENST00000459124 84 ntBASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 SNORA31.11-201ENST00000516528 139 ntBASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 MIR4744-201ENST00000581563 82 ntBASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM55Q9BYV6 ZNF702P-202ENST00000434269 1966 ntBASIC2.58□□□□□ -2
TRIM55Q9BYV6 Y_RNA.182-201ENST00000363880 111 ntBASIC2.58□□□□□ -2
TRIM55Q9BYV6 SNRPGP10-201ENST00000432323 225 ntBASIC2.58□□□□□ -2
TRIM55Q9BYV6 Y_RNA.797-201ENST00000515977 94 ntBASIC2.58□□□□□ -2
TRIM55Q9BYV6 FO624990.1-201ENST00000636373 85 ntBASIC2.58□□□□□ -2
TRIM55Q9BYV6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM55Q9BYV6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM55Q9BYV6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM55Q9BYV6 Y_RNA.265-201ENST00000364677 108 ntBASIC2.57□□□□□ -2
TRIM55Q9BYV6 Y_RNA.412-201ENST00000384001 104 ntBASIC2.57□□□□□ -2
TRIM55Q9BYV6 MIR9-1-201ENST00000385198 89 ntBASIC2.57□□□□□ -2
TRIM55Q9BYV6 AL606845.1-201ENST00000404881 255 ntBASIC2.57□□□□□ -2
TRIM55Q9BYV6 RNU4-61P-201ENST00000411243 107 ntBASIC2.57□□□□□ -2
TRIM55Q9BYV6 STAG3L5P-204ENST00000443759 179 ntBASIC2.57□□□□□ -2
TRIM55Q9BYV6 AL049861.1-201ENST00000603130 150 ntBASIC2.57□□□□□ -2
TRIM55Q9BYV6 AC108706.1-201ENST00000611053 297 ntBASIC2.57□□□□□ -2
TRIM55Q9BYV6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -2
TRIM55Q9BYV6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
TRIM55Q9BYV6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM55Q9BYV6 MIR126-201ENST00000362291 85 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 Y_RNA.75-201ENST00000362927 97 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 Y_RNA.180-201ENST00000363867 113 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 RNU6-950P-201ENST00000384651 107 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 RNU6-578P-201ENST00000390980 103 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 RNU6-1228P-201ENST00000391014 107 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 RNA5SP482-201ENST00000391269 118 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 MIR548M-201ENST00000408260 86 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 AL158823.1-201ENST00000418441 478 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 AL513328.1-201ENST00000446460 224 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 RNU7-28P-201ENST00000516759 62 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 SNORA31.17-201ENST00000516953 127 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.56□□□□□ -2
TRIM55Q9BYV6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.56□□□□□ -2
TRIM55Q9BYV6 AL137847.3-201ENST00000611521 109 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 U6.106-201ENST00000636360 105 ntBASIC2.56□□□□□ -2
TRIM55Q9BYV6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TRIM55Q9BYV6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.55□□□□□ -2
TRIM55Q9BYV6 RNA5SP68-201ENST00000363885 119 ntBASIC2.55□□□□□ -2
TRIM55Q9BYV6 Y_RNA.240-201ENST00000364469 95 ntBASIC2.55□□□□□ -2
TRIM55Q9BYV6 RNY3P5-201ENST00000384127 102 ntBASIC2.55□□□□□ -2
TRIM55Q9BYV6 Y_RNA.587-201ENST00000391210 103 ntBASIC2.55□□□□□ -2
TRIM55Q9BYV6 RN7SKP200-201ENST00000410564 320 ntBASIC2.55□□□□□ -2
TRIM55Q9BYV6 RNA5SP21-201ENST00000410917 96 ntBASIC2.55□□□□□ -2
TRIM55Q9BYV6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.55□□□□□ -2
TRIM55Q9BYV6 RNA5SP57-201ENST00000459463 123 ntBASIC2.55□□□□□ -2
TRIM55Q9BYV6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.55□□□□□ -2
TRIM55Q9BYV6 Y_RNA.662-201ENST00000516028 97 ntBASIC2.55□□□□□ -2
TRIM55Q9BYV6 RNA5SP481-201ENST00000516814 122 ntBASIC2.55□□□□□ -2
TRIM55Q9BYV6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.55□□□□□ -2
TRIM55Q9BYV6 MIR6817-201ENST00000615588 66 ntBASIC2.55□□□□□ -2
TRIM55Q9BYV6 RNA5SP432-201ENST00000362480 116 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 SNORD68-201ENST00000363214 84 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 RNU6-275P-201ENST00000364910 107 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 MIR522-201ENST00000385071 87 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 SNORA12.1-201ENST00000390873 148 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 MLLT10P1-201ENST00000418346 262 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 AC023449.1-201ENST00000454464 154 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 NDUFA4P2-201ENST00000489989 244 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 OR9P1P-201ENST00000496431 281 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 AC008413.1-201ENST00000511864 177 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 RNA5SP148-201ENST00000516527 94 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 AC109810.1-201ENST00000534066 224 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 MRPS18CP4-201ENST00000535821 231 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 SNORA28-201ENST00000606769 126 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 uc_338.4-201ENST00000616635 176 ntBASIC2.54□□□□□ -2
TRIM55Q9BYV6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM55Q9BYV6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM55Q9BYV6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
TRIM55Q9BYV6 SNORA80E-201ENST00000384744 137 ntBASIC2.53□□□□□ -2
TRIM55Q9BYV6 snoU13.27-201ENST00000459278 104 ntBASIC2.53□□□□□ -2
TRIM55Q9BYV6 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
TRIM55Q9BYV6 RNU6-255P-201ENST00000516957 105 ntBASIC2.53□□□□□ -2
TRIM55Q9BYV6 MIR4762-201ENST00000585261 75 ntBASIC2.53□□□□□ -2
TRIM55Q9BYV6 AC008555.8-201ENST00000623602 2168 ntBASIC2.53□□□□□ -2
TRIM55Q9BYV6 Y_RNA.8-201ENST00000362353 102 ntBASIC2.52□□□□□ -2.01
TRIM55Q9BYV6 U8.5-201ENST00000364528 136 ntBASIC2.52□□□□□ -2.01
TRIM55Q9BYV6 RNU6-1031P-201ENST00000384773 107 ntBASIC2.52□□□□□ -2.01
TRIM55Q9BYV6 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
TRIM55Q9BYV6 RNU6-131P-201ENST00000391144 107 ntBASIC2.52□□□□□ -2.01
TRIM55Q9BYV6 RNU7-34P-201ENST00000459394 64 ntBASIC2.52□□□□□ -2.01
TRIM55Q9BYV6 RNU6-561P-201ENST00000516222 102 ntBASIC2.52□□□□□ -2.01
TRIM55Q9BYV6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.52□□□□□ -2.01
TRIM55Q9BYV6 AC104465.1-201ENST00000611365 139 ntBASIC2.52□□□□□ -2.01
TRIM55Q9BYV6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM55Q9BYV6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM55Q9BYV6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 Y_RNA.23-201ENST00000362496 106 ntBASIC2.51□□□□□ -2.01
TRIM55Q9BYV6 RNU6-187P-201ENST00000384139 106 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms