Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNA5SP99-201ENST00000364020 114 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 RNU6-755P-201ENST00000364400 103 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 Y_RNA.337-201ENST00000365312 102 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 SNORD116-14-201ENST00000383894 92 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 RNU6-969P-201ENST00000383900 105 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 SNORD116-17-201ENST00000383929 92 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 SNORD116-15-201ENST00000384445 92 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 SNORA20-201ENST00000384662 132 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 SNORD116-19-201ENST00000384729 92 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.48□□□□□ -2.01
SALL3Q9BXA9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 SNORD65B-201ENST00000459126 73 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 RPL23AP42-201ENST00000471152 471 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 CKS1BP2-201ENST00000497342 240 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 RNU7-116P-201ENST00000516940 62 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.48□□□□□ -2.01
SALL3Q9BXA9 AC127455.1-201ENST00000565496 145 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 DNAJC19P2-201ENST00000593340 302 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 AP003357.1-201ENST00000604497 148 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 MIR6129-201ENST00000616087 109 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 AC090517.3-201ENST00000625170 141 ntBASIC2.48□□□□□ -2.01
SALL3Q9BXA9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SALL3Q9BXA9 Y_RNA.4-201ENST00000362333 112 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 RNU1-72P-201ENST00000362976 153 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 RNU4-10P-201ENST00000364383 140 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 RNU6-1274P-201ENST00000384557 107 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 MIR764-201ENST00000390811 85 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 MIR1289-2-201ENST00000408360 111 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 HMGN2P3-201ENST00000433603 273 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 HMGN2P5-201ENST00000436882 273 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.47□□□□□ -2.01
SALL3Q9BXA9 RNU6-1337P-201ENST00000516525 95 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 RNU2-34P-201ENST00000516534 121 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 RNU6-586P-201ENST00000517265 104 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 RNU1-104P-201ENST00000517280 175 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 MIR219B-201ENST00000637023 88 ntBASIC2.47□□□□□ -2.01
SALL3Q9BXA9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SALL3Q9BXA9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SALL3Q9BXA9 RNY1P11-201ENST00000363759 113 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 RNU6-944P-201ENST00000364023 107 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 Y_RNA.226-201ENST00000364337 114 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 RNA5SP37-201ENST00000365420 130 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 Y_RNA.572-201ENST00000384757 98 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 RPL30P4-201ENST00000429309 333 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 HSPE1P21-201ENST00000438283 308 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 AL137159.1-201ENST00000452808 512 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.46□□□□□ -2.02
SALL3Q9BXA9 AC080013.2-201ENST00000460866 323 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 RPS26P55-201ENST00000471178 356 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 RNU6-453P-201ENST00000516819 85 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.46□□□□□ -2.02
SALL3Q9BXA9 AL359881.1-201ENST00000602916 267 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 SNRPGP19-201ENST00000603826 189 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 AC005972.2-201ENST00000604690 348 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 AL591926.4-201ENST00000616895 298 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 MIR548AY-201ENST00000617669 107 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 MIR6873-201ENST00000622788 63 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 AC012640.5-201ENST00000623897 319 ntBASIC2.46□□□□□ -2.02
SALL3Q9BXA9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.46□□□□□ -2.02
SALL3Q9BXA9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SALL3Q9BXA9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SALL3Q9BXA9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SALL3Q9BXA9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
SALL3Q9BXA9 Y_RNA.172-201ENST00000363765 102 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 RNU6-674P-201ENST00000363831 107 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 Y_RNA.229-201ENST00000364347 113 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 SNORA67.1-201ENST00000364749 141 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 RNU6-1235P-201ENST00000384559 107 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 SNORA36B-201ENST00000410438 131 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 RNU4-43P-201ENST00000410628 137 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SALL3Q9BXA9 RNU6-498P-201ENST00000459468 107 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 AC090255.1-201ENST00000495779 349 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 ATP5EP1-201ENST00000510257 156 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 RNU6-168P-201ENST00000516189 101 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.45□□□□□ -2.02
SALL3Q9BXA9 AC105245.1-201ENST00000581934 244 ntBASIC2.45□□□□□ -2.02
SALL3Q9BXA9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SALL3Q9BXA9 MIR367-201ENST00000362299 68 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 Y_RNA.124-201ENST00000363339 93 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 MIR95-201ENST00000385072 81 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 RNA5SP496-201ENST00000391240 109 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 RNY4P29-201ENST00000410801 97 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 RPL30P13-201ENST00000418873 348 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 AC008134.1-201ENST00000420943 193 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 RNU7-107P-201ENST00000459121 61 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 AC079804.2-201ENST00000490376 200 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 AC117454.1-201ENST00000491120 168 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 MIR449C-201ENST00000516047 92 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 RNU6-659P-201ENST00000516454 104 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 RNU6-589P-201ENST00000516485 107 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 RNU6-762P-201ENST00000517107 102 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 AC025647.1-201ENST00000517879 253 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 MIR3646-201ENST00000578301 84 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
SALL3Q9BXA9 AC010332.2-201ENST00000613083 1904 ntBASIC2.44□□□□□ -2.02
SALL3Q9BXA9 RNA5SP125-201ENST00000364843 120 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 RNU6-728P-201ENST00000365375 104 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms