Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.15□□□□□ -1.9
ZKSCAN3Q9BRR0 ZNF271P-202ENST00000465539 1970 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 Y_RNA.267-201ENST00000364679 109 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 SNORD61-201ENST00000384252 73 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 Y_RNA.510-201ENST00000384511 114 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR515-2-201ENST00000384883 83 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR515-1-201ENST00000384884 83 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR634-201ENST00000385208 97 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 SNORD72-201ENST00000390994 80 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU1-131P-201ENST00000458943 161 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 Y_RNA.651-201ENST00000459380 103 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 RN7SL636P-201ENST00000497504 294 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 AC096725.1-201ENST00000514266 313 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 SNORA9.3-201ENST00000516383 129 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR3613-201ENST00000579844 87 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 AC025166.1-201ENST00000612411 163 ntBASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.15□□□□□ -1.91
ZKSCAN3Q9BRR0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 SNORA25B-201ENST00000365507 128 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 AL590004.2-201ENST00000404787 371 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 AL021397.1-201ENST00000451806 248 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 AL109933.2-201ENST00000452651 260 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU7-94P-201ENST00000459576 63 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU6-1270P-201ENST00000517128 108 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR4635-201ENST00000583759 79 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR6852-201ENST00000621699 66 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 SCARNA15.3-201ENST00000626315 122 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 SCARNA4.1-201ENST00000628597 123 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 U6.108-201ENST00000637764 58 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 MTND5P32-201ENST00000560711 1802 ntBASIC3.14□□□□□ -1.91
ZKSCAN3Q9BRR0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR126-201ENST00000362291 85 ntBASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU6-880P-201ENST00000384526 107 ntBASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 RNA5SP323-201ENST00000391094 133 ntBASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 ATP5J2P3-201ENST00000451550 258 ntBASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 RNA5SP236-201ENST00000516169 116 ntBASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR4679-2-201ENST00000578358 77 ntBASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ZKSCAN3Q9BRR0 Y_RNA.35-201ENST00000362601 101 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU6-461P-201ENST00000364195 107 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU6-160P-201ENST00000384591 107 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR9-1-201ENST00000385198 89 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR1289-1-201ENST00000408836 144 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 RNA5SP184-201ENST00000411071 108 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 SNRPGP13-201ENST00000442212 177 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 Y_RNA.649-201ENST00000459077 103 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 AC024995.1-201ENST00000523014 93 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 AP002004.2-201ENST00000531656 154 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 AL591926.4-201ENST00000616895 298 ntBASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.12□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU6-859P-201ENST00000362728 107 ntBASIC3.11□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU6-1164P-201ENST00000364428 107 ntBASIC3.11□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU6-147P-201ENST00000383983 107 ntBASIC3.11□□□□□ -1.91
ZKSCAN3Q9BRR0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.11□□□□□ -1.91
ZKSCAN3Q9BRR0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.11□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU6-693P-201ENST00000516134 107 ntBASIC3.11□□□□□ -1.91
ZKSCAN3Q9BRR0 Y_RNA.666-201ENST00000516187 112 ntBASIC3.11□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU6-113P-201ENST00000516653 101 ntBASIC3.11□□□□□ -1.91
ZKSCAN3Q9BRR0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.11□□□□□ -1.91
ZKSCAN3Q9BRR0 MAPK10-266ENST00000641066 6555 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 RNU6-1298P-201ENST00000362456 101 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 RNA5SP125-201ENST00000364843 120 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 SNORA8-201ENST00000384574 139 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR196B-201ENST00000384852 84 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR802-201ENST00000390235 94 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 RN7SKP123-201ENST00000410732 291 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 FTH1P12-201ENST00000432137 551 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 AL049830.1-201ENST00000468034 425 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 AC006023.1-201ENST00000603944 259 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 AC022217.4-201ENST00000604389 163 ntBASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZKSCAN3Q9BRR0 MTND5P18-201ENST00000445624 1801 ntBASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 SNORA1B-201ENST00000362535 133 ntBASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 SNORD114-6-201ENST00000364393 72 ntBASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 MIR522-201ENST00000385071 87 ntBASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 SNORA26.7-201ENST00000391288 122 ntBASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 AL117342.1-201ENST00000404861 406 ntBASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 CST2P1-201ENST00000425770 87 ntBASIC3.09□□□□□ -1.91
ZKSCAN3Q9BRR0 AC104332.2-201ENST00000429959 156 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms