Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 AC097462.1-201ENST00000514125 324 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 RNU7-99P-201ENST00000516271 62 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 RNU2-31P-201ENST00000516954 155 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 AC010900.2-201ENST00000604508 210 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 AL157834.3-201ENST00000615543 103 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 U4.1-201ENST00000620349 87 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 U6.104-201ENST00000637979 90 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 ZNF209P-201ENST00000593450 2304 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 Y_RNA.172-201ENST00000363765 102 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 RNU4-13P-201ENST00000364019 141 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 RNY1-201ENST00000364228 113 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 SNORA63D-201ENST00000364359 132 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 Y_RNA.237-201ENST00000364439 102 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 RNU6-326P-201ENST00000365480 107 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 RNU6-136P-201ENST00000384663 107 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 SNORA53-201ENST00000391141 249 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 AC009310.1-201ENST00000414414 451 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 RNU6-1337P-201ENST00000516525 95 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 RNU6-63P-201ENST00000516690 95 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 RNU1-92P-201ENST00000517017 135 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 RNU7-172P-201ENST00000517125 64 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 RPL21P9-201ENST00000556149 474 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 AC022254.1-201ENST00000567857 235 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 MIR3198-2-201ENST00000577868 80 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
RTP3Q9BQQ7 Y_RNA.136-201ENST00000363444 102 ntBASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 Y_RNA.556-201ENST00000384677 113 ntBASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 MIR517C-201ENST00000385103 95 ntBASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 AC024067.1-201ENST00000426199 223 ntBASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 MTCO1P5-201ENST00000433573 344 ntBASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 RPS26P45-201ENST00000471748 340 ntBASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 AC008834.1-201ENST00000511612 175 ntBASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 SNORA31.17-201ENST00000516953 127 ntBASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 MIR4421-201ENST00000578133 69 ntBASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 MIR3149-201ENST00000584629 83 ntBASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.65□□□□□ -2.15
RTP3Q9BQQ7 Y_RNA.193-201ENST00000363979 102 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 RNU6-117P-201ENST00000365415 107 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 MIR520A-201ENST00000384862 85 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 RNU6-855P-201ENST00000410395 104 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 RNU6-710P-201ENST00000410424 105 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 RNA5SP511-201ENST00000410487 115 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 RPL31P63-201ENST00000422565 375 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 AL606517.2-201ENST00000442855 241 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 RPS4XP11-201ENST00000446897 772 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 HSPE1P13-201ENST00000451143 297 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 SNORD127-201ENST00000458892 86 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 SERF1AP1-201ENST00000514575 187 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 RNU6-191P-201ENST00000516295 94 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 RNA5SP437-201ENST00000517249 129 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 AC011604.1-201ENST00000545978 196 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 AC073413.2-201ENST00000604332 360 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 AC037487.3-201ENST00000606668 112 ntBASIC1.64□□□□□ -2.15
RTP3Q9BQQ7 SNORA25.1-201ENST00000362326 128 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 Y_RNA.288-201ENST00000364854 92 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 Y_RNA.341-201ENST00000365341 102 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 Y_RNA.452-201ENST00000384202 108 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 SNORD116-13-201ENST00000384408 92 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 RNA5SP109-201ENST00000391010 116 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 MIR934-201ENST00000401241 83 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 AC069257.2-201ENST00000441819 155 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 RPS27P1-201ENST00000450552 247 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 AC015720.1-201ENST00000565251 277 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 AL512605.2-201ENST00000592972 256 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 AC022217.4-201ENST00000604389 163 ntBASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
RTP3Q9BQQ7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 RNU6-702P-201ENST00000364982 107 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 RNU6-514P-201ENST00000384208 107 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 RNU6-376P-201ENST00000384731 106 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 RNU6-1248P-201ENST00000391096 64 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 RNU2-38P-201ENST00000410856 79 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 AC010154.1-201ENST00000425857 269 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 AL135790.2-201ENST00000437701 267 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 AC091959.1-201ENST00000495857 238 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 RNU6-1278P-201ENST00000516130 107 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 Y_RNA.668-201ENST00000516233 93 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 AC012433.1-201ENST00000588916 398 ntBASIC1.62□□□□□ -2.15
RTP3Q9BQQ7 MIR335-201ENST00000362173 94 ntBASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 SNORD114-26-201ENST00000363543 72 ntBASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 Y_RNA.310-201ENST00000365063 113 ntBASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 Y_RNA.368-201ENST00000365547 113 ntBASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 RNU2-7P-201ENST00000410794 178 ntBASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 RPS20P10-201ENST00000451209 253 ntBASIC1.61□□□□□ -2.15
RTP3Q9BQQ7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 298.6 ms