Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6-1209P-201ENST00000363655 107 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 Y_RNA.218-201ENST00000364218 104 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 SNORA25B-201ENST00000365507 128 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 RNU6-735P-201ENST00000410612 107 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 AC007064.1-201ENST00000412238 351 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 AC003685.2-201ENST00000422795 395 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.21□□□□□ -2.06
TIMP4Q99727 AC245102.2-201ENST00000448956 180 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 RN7SL636P-201ENST00000497504 294 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 RNU6-1146P-201ENST00000516282 102 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.21□□□□□ -2.06
TIMP4Q99727 MIR3646-201ENST00000578301 84 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 SNORD53-201ENST00000579969 78 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 MIR2681-201ENST00000581814 105 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 MIR3945-201ENST00000581853 98 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 AC120024.3-201ENST00000603167 156 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 AL021707.8-201ENST00000609428 183 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 FO624990.1-201ENST00000636373 85 ntBASIC2.21□□□□□ -2.06
TIMP4Q99727 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TIMP4Q99727 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
TIMP4Q99727 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
TIMP4Q99727 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
TIMP4Q99727 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TIMP4Q99727 Y_RNA.796-201ENST00000364268 102 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 SNORD114-6-201ENST00000364393 72 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 Y_RNA.799-201ENST00000364992 102 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 RNU2-70P-201ENST00000410718 179 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 SUMO1P4-201ENST00000429430 302 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 RPS15AP28-201ENST00000435088 386 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 AC008267.6-201ENST00000441664 139 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 RNU7-26P-201ENST00000458980 63 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 TRBV12-1-201ENST00000479785 344 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.2□□□□□ -2.06
TIMP4Q99727 RNU6-197P-201ENST00000516680 100 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 AC090142.3-201ENST00000519012 385 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.2□□□□□ -2.06
TIMP4Q99727 uc_338.4-201ENST00000616635 176 ntBASIC2.2□□□□□ -2.06
TIMP4Q99727 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
TIMP4Q99727 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.19□□□□□ -2.06
TIMP4Q99727 snoU2-30.2-201ENST00000362805 70 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 Y_RNA.267-201ENST00000364679 109 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 RNU6-484P-201ENST00000384016 107 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 RNU1-138P-201ENST00000384093 164 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 SNORA75.5-201ENST00000391291 81 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 EDDM3CP-201ENST00000415977 425 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TIMP4Q99727 RNU6-1333P-201ENST00000516162 93 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 RNU6-1291P-201ENST00000516591 104 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 AP001328.1-201ENST00000528550 176 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 AC007229.1-201ENST00000590455 412 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 JPX_2.1-201ENST00000614161 69 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 TUG1_4.1-201ENST00000619464 181 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 AC064859.1-201ENST00000624741 174 ntBASIC2.19□□□□□ -2.06
TIMP4Q99727 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TIMP4Q99727 Y_RNA.91-201ENST00000363042 107 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 RNU1-96P-201ENST00000364163 162 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 MIR539-201ENST00000365690 78 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 RNU4-53P-201ENST00000410828 140 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 RNU2-55P-201ENST00000411146 174 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 AC009238.1-201ENST00000442165 424 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 AC009237.6-201ENST00000446969 424 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 SNORD11-201ENST00000459124 84 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 AC234781.5-201ENST00000508429 271 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 RNU7-99P-201ENST00000516271 62 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.18□□□□□ -2.06
TIMP4Q99727 AL049779.4-201ENST00000604500 156 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 Pinc.1-201ENST00000616452 154 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 MIR338-201ENST00000636369 67 ntBASIC2.18□□□□□ -2.06
TIMP4Q99727 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.18□□□□□ -2.06
TIMP4Q99727 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
TIMP4Q99727 SNORA33-201ENST00000363664 130 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 SNORA25.7-201ENST00000364375 127 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 SNORA67.1-201ENST00000364749 141 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 RNU1-52P-201ENST00000384190 164 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 MIR520G-201ENST00000385064 90 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TIMP4Q99727 RNA5SP323-201ENST00000391094 133 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 MIR1262-201ENST00000408276 93 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.17□□□□□ -2.06
TIMP4Q99727 YWHAEP4-201ENST00000505390 198 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 SNORD77.4-201ENST00000516158 81 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 RNA5SP24-201ENST00000516478 95 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 RNU7-149P-201ENST00000516739 59 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 AL359881.1-201ENST00000602916 267 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 AC046143.2-201ENST00000609789 160 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 AL359075.3-201ENST00000613288 217 ntBASIC2.17□□□□□ -2.06
TIMP4Q99727 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TIMP4Q99727 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TIMP4Q99727 SNORD115-3-201ENST00000363100 82 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 Y_RNA.127-201ENST00000363386 109 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 RNU6-978P-201ENST00000364371 103 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 Y_RNA.251-201ENST00000364551 99 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 Y_RNA.634-201ENST00000364811 113 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 RNU6-915P-201ENST00000364943 103 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 RNU6-597P-201ENST00000365620 102 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 Y_RNA.584-201ENST00000391090 114 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 SRIP3-201ENST00000413200 219 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 MLLT10P1-201ENST00000418346 262 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 AC245047.4-201ENST00000433189 144 ntBASIC2.16□□□□□ -2.06
TIMP4Q99727 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 225.4 ms