Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 SNORA63-201ENST00000363450 132 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 Y_RNA.158-201ENST00000363651 101 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RNU6-454P-201ENST00000364292 107 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RNU6-1305P-201ENST00000364353 104 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 Y_RNA.389-201ENST00000383924 113 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RNU6-1145P-201ENST00000384246 107 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 SNORA69.1-201ENST00000390904 137 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RNU6-700P-201ENST00000391043 107 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 MRPL35P1-201ENST00000404272 572 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 AL590004.1-201ENST00000405321 300 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 MIR548F4-201ENST00000408515 105 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RNU6-985P-201ENST00000410182 104 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RNU2-7P-201ENST00000410794 178 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 AC114482.1-201ENST00000418010 247 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RPL21P38-201ENST00000418090 167 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 MTCYBP10-201ENST00000424905 650 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 USP9YP16-201ENST00000430287 407 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 AL135790.2-201ENST00000437701 267 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 AC099799.1-201ENST00000439809 192 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RPEP5-201ENST00000441137 268 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 NDUFB4P10-201ENST00000452541 359 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 USP9YP23-201ENST00000455085 407 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RNU7-57P-201ENST00000459540 60 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 SNORA25.10-201ENST00000515926 124 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 SNORA25.14-201ENST00000516481 132 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RNU11-2P-201ENST00000516898 142 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 Y_RNA.706-201ENST00000516933 99 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RNA5SP54-201ENST00000516951 92 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RNU1-117P-201ENST00000517041 158 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 RNU6-897P-201ENST00000517135 105 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 AC090617.3-201ENST00000573670 475 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 AC124312.5-201ENST00000604451 268 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 AC100812.1-201ENST00000607622 580 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 AC240442.1-201ENST00000616055 283 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 MIR8063-201ENST00000621930 81 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 AC068700.1-201ENST00000565862 3754 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-1309P-201ENST00000363305 108 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-238P-201ENST00000363313 106 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 Y_RNA.143-201ENST00000363520 106 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 Y_RNA.210-201ENST00000364161 110 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU1-115P-201ENST00000365329 160 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 Y_RNA.459-201ENST00000384251 102 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-937P-201ENST00000384325 106 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-417P-201ENST00000384712 107 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 MIR153-2-201ENST00000385225 87 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 MT-TW-201ENST00000387382 68 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNA5SP467-201ENST00000391274 118 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU4-30P-201ENST00000410245 143 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 SNORD12B-201ENST00000410433 91 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-1199P-201ENST00000411249 104 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-57P-201ENST00000411348 103 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.95□□□□□ -2.26
CDX2Q99626 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-408P-201ENST00000515910 100 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-1114P-201ENST00000516022 107 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-1146P-201ENST00000516282 102 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-764P-201ENST00000516396 105 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-1012P-201ENST00000516606 109 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 Y_RNA.721-201ENST00000517207 102 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 RNU6-988P-201ENST00000519081 107 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 AC131281.1-201ENST00000522984 164 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 MIR4711-201ENST00000578274 70 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 MIR4659A-201ENST00000580269 81 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 AC022217.4-201ENST00000604389 163 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 AC006001.4-201ENST00000622243 395 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
CDX2Q99626 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.95□□□□□ -2.26
CDX2Q99626 AC245060.5-201ENST00000610778 3293 ntBASIC0.95□□□□□ -2.26
CDX2Q99626 Y_RNA.16-201ENST00000362421 102 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 Y_RNA.39-201ENST00000362620 98 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 snoU2_19.2-201ENST00000363024 80 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 SNORD81.1-201ENST00000363064 77 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 RNU6-137P-201ENST00000363680 108 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 Y_RNA.172-201ENST00000363765 102 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 SNORD14.1-201ENST00000365609 90 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 RNU6-639P-201ENST00000384074 107 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 Y_RNA.455-201ENST00000384230 98 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 RNU6-505P-201ENST00000384427 107 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 RNU6-541P-201ENST00000384709 110 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 MIR1285-1-201ENST00000408593 84 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 MRPL35P3-201ENST00000421557 364 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 DYNLT3P2-201ENST00000442517 295 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 LINC01399-202ENST00000458450 244 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 SNORA40.9-201ENST00000515895 93 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 SNORA31.10-201ENST00000516482 106 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 Y_RNA.715-201ENST00000517082 110 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 Y_RNA.720-201ENST00000517166 92 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 AL512310.8-201ENST00000550183 120 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 MIR4709-201ENST00000577272 72 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 VN1R91P-201ENST00000594377 169 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 SNORD11B-201ENST00000607707 90 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 AC133104.2-201ENST00000615272 193 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.94□□□□□ -2.26
CDX2Q99626 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
CDX2Q99626 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CDX2Q99626 RNU6-1123P-201ENST00000362347 106 ntBASIC0.93□□□□□ -2.26
CDX2Q99626 Y_RNA.396-201ENST00000383949 103 ntBASIC0.93□□□□□ -2.26
CDX2Q99626 RNU6-20P-201ENST00000384106 107 ntBASIC0.93□□□□□ -2.26
CDX2Q99626 Y_RNA.483-201ENST00000384380 101 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms