Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 RNU7-172P-201ENST00000517125 64 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 RNU7-128P-201ENST00000517247 62 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 MRPS18CP4-201ENST00000535821 231 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 MIR3169-201ENST00000578032 83 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 POLR3GP1-201ENST00000594073 261 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 AP003357.1-201ENST00000604497 148 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 AL365434.2-201ENST00000607979 234 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 MIR548AY-201ENST00000617669 107 ntBASIC2.17□□□□□ -2.06
CCDC17Q96LX7 SNORD115-3-201ENST00000363100 82 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 RNU6-1205P-201ENST00000363625 106 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 Y_RNA.238-201ENST00000364441 102 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 Y_RNA.571-201ENST00000384753 98 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 MIR9-3-201ENST00000385084 90 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 RNU6-381P-201ENST00000391259 108 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 AL353689.1-201ENST00000438895 199 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 SUMO1P3-201ENST00000439961 304 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 AC003989.2-201ENST00000440224 169 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC17Q96LX7 RPL23AP63-201ENST00000498752 471 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 AL137100.2-201ENST00000555786 315 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC17Q96LX7 AC012640.5-201ENST00000623897 319 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 AC022513.1-201ENST00000624512 117 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.16□□□□□ -2.06
CCDC17Q96LX7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CCDC17Q96LX7 RNA5SP99-201ENST00000364020 114 ntBASIC2.15□□□□□ -2.07
CCDC17Q96LX7 RNU6-969P-201ENST00000383900 105 ntBASIC2.15□□□□□ -2.07
CCDC17Q96LX7 Y_RNA.435-201ENST00000384095 112 ntBASIC2.15□□□□□ -2.07
CCDC17Q96LX7 RNU6-160P-201ENST00000384591 107 ntBASIC2.15□□□□□ -2.07
CCDC17Q96LX7 SNORA8.3-201ENST00000384679 139 ntBASIC2.15□□□□□ -2.07
CCDC17Q96LX7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.15□□□□□ -2.07
CCDC17Q96LX7 AC099677.2-201ENST00000436385 175 ntBASIC2.15□□□□□ -2.07
CCDC17Q96LX7 MIR514B-201ENST00000516774 80 ntBASIC2.15□□□□□ -2.07
CCDC17Q96LX7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC17Q96LX7 MIR3683-201ENST00000580847 82 ntBASIC2.15□□□□□ -2.07
CCDC17Q96LX7 U6.106-201ENST00000636360 105 ntBASIC2.15□□□□□ -2.07
CCDC17Q96LX7 AC245060.5-201ENST00000610778 3293 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 Y_RNA.7-201ENST00000362352 102 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 RNU6-862P-201ENST00000362804 105 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 Y_RNA.240-201ENST00000364469 95 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 MT-TT-201ENST00000387460 66 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 MIR526A2-201ENST00000390198 65 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 MIR1278-201ENST00000408753 81 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC17Q96LX7 RPS4XP11-201ENST00000446897 772 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC17Q96LX7 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 RNU6-255P-201ENST00000516957 105 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 AC127455.1-201ENST00000565496 145 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 Y_RNA.802-201ENST00000614892 130 ntBASIC2.14□□□□□ -2.07
CCDC17Q96LX7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC17Q96LX7 RNU4-17P-201ENST00000365598 141 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 RNU6-144P-201ENST00000383951 107 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC17Q96LX7 BX510359.4-201ENST00000423750 193 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC17Q96LX7 RPS27P21-201ENST00000486977 252 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 RPL23AP54-201ENST00000495129 419 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 Y_RNA.662-201ENST00000516028 97 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 RNU6-250P-201ENST00000516958 103 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 MIR4255-201ENST00000579351 72 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 AL929325.1-201ENST00000603096 117 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 AC073413.2-201ENST00000604332 360 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 AC084768.2-201ENST00000622736 221 ntBASIC2.13□□□□□ -2.07
CCDC17Q96LX7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC17Q96LX7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC17Q96LX7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC17Q96LX7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CCDC17Q96LX7 RNU1-17P-201ENST00000363022 152 ntBASIC2.12□□□□□ -2.07
CCDC17Q96LX7 Y_RNA.412-201ENST00000384001 104 ntBASIC2.12□□□□□ -2.07
CCDC17Q96LX7 RNU4-70P-201ENST00000384579 139 ntBASIC2.12□□□□□ -2.07
CCDC17Q96LX7 SNORA40.19-201ENST00000390846 128 ntBASIC2.12□□□□□ -2.07
CCDC17Q96LX7 RNU6-1135P-201ENST00000411083 103 ntBASIC2.12□□□□□ -2.07
CCDC17Q96LX7 RPS29P11-201ENST00000496507 171 ntBASIC2.12□□□□□ -2.07
CCDC17Q96LX7 RNU6-1278P-201ENST00000516130 107 ntBASIC2.12□□□□□ -2.07
CCDC17Q96LX7 RNU7-99P-201ENST00000516271 62 ntBASIC2.12□□□□□ -2.07
CCDC17Q96LX7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC17Q96LX7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC17Q96LX7 MIR3126-201ENST00000577443 74 ntBASIC2.12□□□□□ -2.07
CCDC17Q96LX7 AC026271.5-201ENST00000577873 130 ntBASIC2.12□□□□□ -2.07
CCDC17Q96LX7 AL353149.1-201ENST00000610667 244 ntBASIC2.12□□□□□ -2.07
CCDC17Q96LX7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC17Q96LX7 Y_RNA.182-201ENST00000363880 111 ntBASIC2.11□□□□□ -2.07
CCDC17Q96LX7 RNU4-13P-201ENST00000364019 141 ntBASIC2.11□□□□□ -2.07
CCDC17Q96LX7 Y_RNA.229-201ENST00000364347 113 ntBASIC2.11□□□□□ -2.07
CCDC17Q96LX7 Y_RNA.464-201ENST00000384282 110 ntBASIC2.11□□□□□ -2.07
CCDC17Q96LX7 RNU6-376P-201ENST00000384731 106 ntBASIC2.11□□□□□ -2.07
CCDC17Q96LX7 RNU5E-9P-201ENST00000411164 104 ntBASIC2.11□□□□□ -2.07
CCDC17Q96LX7 MTND2P29-201ENST00000438595 412 ntBASIC2.11□□□□□ -2.07
CCDC17Q96LX7 AC245047.8-201ENST00000456455 284 ntBASIC2.11□□□□□ -2.07
CCDC17Q96LX7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC17Q96LX7 RNU7-116P-201ENST00000516940 62 ntBASIC2.11□□□□□ -2.07
CCDC17Q96LX7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC17Q96LX7 MIR4724-201ENST00000579485 89 ntBASIC2.11□□□□□ -2.07
CCDC17Q96LX7 AC091178.2-201ENST00000584401 117 ntBASIC2.11□□□□□ -2.07
CCDC17Q96LX7 AL031274.2-201ENST00000599419 203 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms