Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SNORD114-30-201ENST00000364448 72 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.337-201ENST00000365312 102 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.343-201ENST00000365354 112 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 RNU6-376P-201ENST00000384731 106 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 MIR27B-201ENST00000385129 97 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 RNA5SP467-201ENST00000391274 118 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 AC018634.1-201ENST00000437554 401 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 AC009238.1-201ENST00000442165 424 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 AC104389.3-201ENST00000445629 235 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 AC009237.6-201ENST00000446969 424 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 AC026436.1-201ENST00000510537 270 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 RNA5SP272-201ENST00000516095 111 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 RNU7-99P-201ENST00000516271 62 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 AC011604.1-201ENST00000545978 196 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 AC067747.1-201ENST00000608026 250 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 ZNF702P-202ENST00000434269 1966 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 AC100821.1-201ENST00000523153 2479 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 RNU4-11P-201ENST00000365287 132 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 RNU6-484P-201ENST00000384016 107 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.586-201ENST00000391146 98 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 RNU4-53P-201ENST00000410828 140 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 SNORD11-201ENST00000459124 84 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 MIR548X2-201ENST00000579776 100 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 MIR4781-201ENST00000585250 76 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 AC073413.2-201ENST00000604332 360 ntBASIC2.73□□□□□ -1.97
CHAMP1Q96JM3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CHAMP1Q96JM3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
CHAMP1Q96JM3 SNORA33-201ENST00000363664 130 ntBASIC2.72□□□□□ -1.97
CHAMP1Q96JM3 AL512604.1-201ENST00000404812 257 ntBASIC2.72□□□□□ -1.97
CHAMP1Q96JM3 RNU6-257P-201ENST00000410238 98 ntBASIC2.72□□□□□ -1.97
CHAMP1Q96JM3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.72□□□□□ -1.97
CHAMP1Q96JM3 EDDM3CP-201ENST00000415977 425 ntBASIC2.72□□□□□ -1.97
CHAMP1Q96JM3 RPS15AP28-201ENST00000435088 386 ntBASIC2.72□□□□□ -1.97
CHAMP1Q96JM3 RNU7-197P-201ENST00000458836 62 ntBASIC2.72□□□□□ -1.97
CHAMP1Q96JM3 SNORA31.11-201ENST00000516528 139 ntBASIC2.72□□□□□ -1.97
CHAMP1Q96JM3 AC080100.1-201ENST00000624239 5356 ntBASIC2.71□□□□□ -1.98
CHAMP1Q96JM3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.71□□□□□ -1.98
CHAMP1Q96JM3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.71□□□□□ -1.98
CHAMP1Q96JM3 RNU6-768P-201ENST00000384683 107 ntBASIC2.71□□□□□ -1.98
CHAMP1Q96JM3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.71□□□□□ -1.98
CHAMP1Q96JM3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.71□□□□□ -1.98
CHAMP1Q96JM3 AC007229.1-201ENST00000590455 412 ntBASIC2.71□□□□□ -1.98
CHAMP1Q96JM3 AL049861.1-201ENST00000603130 150 ntBASIC2.71□□□□□ -1.98
CHAMP1Q96JM3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHAMP1Q96JM3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHAMP1Q96JM3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 Y_RNA.291-201ENST00000364886 113 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 RNU6-160P-201ENST00000384591 107 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 SNORA67.4-201ENST00000384688 142 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 MIR520G-201ENST00000385064 90 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 RNU2-55P-201ENST00000411146 174 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 RN7SL636P-201ENST00000497504 294 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 SNORA31.15-201ENST00000516771 132 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 RPL23AP91-201ENST00000569211 455 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 MIR3169-201ENST00000578032 83 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 AL449363.1-201ENST00000617815 186 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 CTSLP2-204ENST00000629029 392 ntBASIC2.7□□□□□ -1.98
CHAMP1Q96JM3 RNY1P11-201ENST00000363759 113 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 RNA5SP493-201ENST00000364115 91 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 RNU6-959P-201ENST00000384671 107 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 MIR562-201ENST00000384894 95 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 SNORD77.4-201ENST00000516158 81 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 CYCSP26-201ENST00000534107 320 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 AL160236.1-201ENST00000556317 195 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 MIR3646-201ENST00000578301 84 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 MIR2681-201ENST00000581814 105 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 AL031274.2-201ENST00000599419 203 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 AL359075.3-201ENST00000613288 217 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 uc_338.4-201ENST00000616635 176 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 AC022513.1-201ENST00000624512 117 ntBASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHAMP1Q96JM3 AC010332.2-201ENST00000613083 1904 ntBASIC2.68□□□□□ -1.98
CHAMP1Q96JM3 SNORA80E-201ENST00000384744 137 ntBASIC2.68□□□□□ -1.98
CHAMP1Q96JM3 AL359511.1-201ENST00000402970 211 ntBASIC2.68□□□□□ -1.98
CHAMP1Q96JM3 UBBP3-201ENST00000445497 241 ntBASIC2.68□□□□□ -1.98
CHAMP1Q96JM3 RPS26P45-201ENST00000471748 340 ntBASIC2.68□□□□□ -1.98
CHAMP1Q96JM3 RNU6-197P-201ENST00000516680 100 ntBASIC2.68□□□□□ -1.98
CHAMP1Q96JM3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.68□□□□□ -1.98
CHAMP1Q96JM3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.68□□□□□ -1.98
CHAMP1Q96JM3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms