Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RNA5SP270-201ENST00000411361 118 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 CYCSP49-201ENST00000420810 319 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.9□□□□□ -2.11
RTP4Q96DX8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.9□□□□□ -2.11
RTP4Q96DX8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.9□□□□□ -2.11
RTP4Q96DX8 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 RNU6-255P-201ENST00000516957 105 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 RNU7-128P-201ENST00000517247 62 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.9□□□□□ -2.11
RTP4Q96DX8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
RTP4Q96DX8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 AL031274.2-201ENST00000599419 203 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 AC072026.1-201ENST00000605023 201 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 MIR548AY-201ENST00000617669 107 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 AC006435.5-201ENST00000624486 112 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 AC022513.1-201ENST00000624512 117 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 MIR338-201ENST00000636369 67 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 U6.108-201ENST00000637764 58 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 CENPCP1-201ENST00000533085 2578 ntBASIC1.9□□□□□ -2.11
RTP4Q96DX8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RTP4Q96DX8 snoU2-30.2-201ENST00000362805 70 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 RNU6-774P-201ENST00000363238 107 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 RNU6-1205P-201ENST00000363625 106 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 RNU4-17P-201ENST00000365598 141 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 RNU6-969P-201ENST00000383900 105 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 Y_RNA.435-201ENST00000384095 112 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 MT-TT-201ENST00000387460 66 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 AL117342.1-201ENST00000404861 406 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 MIR1278-201ENST00000408753 81 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 RNU5E-9P-201ENST00000411164 104 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.89□□□□□ -2.11
RTP4Q96DX8 RNU7-193P-201ENST00000516723 65 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.89□□□□□ -2.11
RTP4Q96DX8 MRPS18CP4-201ENST00000535821 231 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 POLR3GP1-201ENST00000594073 261 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 AP003357.1-201ENST00000604497 148 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 AC005972.2-201ENST00000604690 348 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 MIR6840-201ENST00000611937 71 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 U6.73-201ENST00000619194 103 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 U6.106-201ENST00000636360 105 ntBASIC1.89□□□□□ -2.11
RTP4Q96DX8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RTP4Q96DX8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RTP4Q96DX8 RNA5SP493-201ENST00000364115 91 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 RNU1-96P-201ENST00000364163 162 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 Y_RNA.238-201ENST00000364441 102 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 Y_RNA.412-201ENST00000384001 104 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 RNU6-1323P-201ENST00000384025 107 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 MIR524-201ENST00000385242 87 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 MIR1253-201ENST00000408273 105 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 RNU6-1186P-201ENST00000410429 97 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 SNORA36B-201ENST00000410438 131 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 EBAG9P1-201ENST00000418955 543 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 AL162725.1-201ENST00000435405 301 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 RPS4XP11-201ENST00000446897 772 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.88□□□□□ -2.11
RTP4Q96DX8 RNU7-172P-201ENST00000517125 64 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.88□□□□□ -2.11
RTP4Q96DX8 MIR3169-201ENST00000578032 83 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 AL929325.1-201ENST00000603096 117 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.88□□□□□ -2.11
RTP4Q96DX8 AC021753.1-201ENST00000635724 168 ntBASIC1.88□□□□□ -2.11
RTP4Q96DX8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RTP4Q96DX8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RTP4Q96DX8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
RTP4Q96DX8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
RTP4Q96DX8 Y_RNA.7-201ENST00000362352 102 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 Y_RNA.240-201ENST00000364469 95 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 SNORA8.3-201ENST00000384679 139 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 SNORA40.18-201ENST00000391200 128 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 HMGN2P39-201ENST00000398005 273 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 BX510359.4-201ENST00000423750 193 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.87□□□□□ -2.11
RTP4Q96DX8 AC099677.2-201ENST00000436385 175 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 AC245047.8-201ENST00000456455 284 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 SNORA31.25-201ENST00000517242 134 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 AC127455.1-201ENST00000565496 145 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 AC073413.2-201ENST00000604332 360 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 AC104465.1-201ENST00000611365 139 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 Y_RNA.802-201ENST00000614892 130 ntBASIC1.87□□□□□ -2.11
RTP4Q96DX8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
RTP4Q96DX8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RTP4Q96DX8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RTP4Q96DX8 RNU6-862P-201ENST00000362804 105 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 RNU1-17P-201ENST00000363022 152 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 Y_RNA.464-201ENST00000384282 110 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 RNU6-804P-201ENST00000384286 107 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 RNU6-160P-201ENST00000384591 107 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 SNORD23.1-201ENST00000408212 104 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 RNU6-1135P-201ENST00000411083 103 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 AL353689.1-201ENST00000438895 199 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 AC245102.2-201ENST00000448956 180 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.86□□□□□ -2.11
RTP4Q96DX8 RNU1-131P-201ENST00000458943 161 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 RPL36AP21-201ENST00000490372 323 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 RPL23AP54-201ENST00000495129 419 ntBASIC1.86□□□□□ -2.11
RTP4Q96DX8 Y_RNA.662-201ENST00000516028 97 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms