Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC005592.1-201ENST00000566527 1640 ntBASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 AC091812.1-201ENST00000432235 1948 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.148-201ENST00000363557 117 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 RNY1-201ENST00000364228 113 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 RNU4-50P-201ENST00000364361 141 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 RNU6-1175P-201ENST00000365200 107 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.445-201ENST00000384168 102 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 RNU6-474P-201ENST00000384243 107 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 RNU6-424P-201ENST00000384367 105 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 MIR7-2-201ENST00000384970 110 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 MIR222-201ENST00000384992 110 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 AL390729.2-201ENST00000416137 156 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 MTND1P14-201ENST00000427400 950 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 AC005042.3-201ENST00000453230 174 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 OR9P1P-201ENST00000496431 281 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 RNU6-947P-201ENST00000516264 106 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 RNU6-1337P-201ENST00000516525 95 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.713-201ENST00000517013 96 ntBASIC1.21□□□□□ -2.22
SNRNP40Q96DI7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.28-201ENST00000362554 111 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 RNU6-797P-201ENST00000363101 109 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 SNORD14.1-201ENST00000365609 90 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 SNORD63-201ENST00000384262 68 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.540-201ENST00000384638 111 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 RNU6-308P-201ENST00000390957 107 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 RNU6-130P-201ENST00000411112 103 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 AL162725.1-201ENST00000435405 301 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 DYNLT3P2-201ENST00000442517 295 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 U8.20-201ENST00000459445 131 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 COX6CP14-201ENST00000469580 174 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 PART1_1.1-201ENST00000611761 217 ntBASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SNRNP40Q96DI7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.439-201ENST00000384119 94 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.551-201ENST00000384661 102 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.645-201ENST00000391229 102 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 AL354751.2-201ENST00000415471 210 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 AC093850.1-201ENST00000454121 251 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 RPL39P39-201ENST00000455840 151 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.631-201ENST00000459607 101 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 SNORA25.10-201ENST00000515926 124 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 AC134503.1-201ENST00000633048 54 ntBASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
SNRNP40Q96DI7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 SNORD81.1-201ENST00000363064 77 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 SNORD68-201ENST00000363214 84 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.128-201ENST00000363391 112 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 RNU1-93P-201ENST00000364704 169 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 SNORA2.2-201ENST00000365473 135 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 SNORD116-13-201ENST00000384408 92 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 RNU6-1105P-201ENST00000384774 107 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 RNA5SP511-201ENST00000410487 115 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 RPS4XP11-201ENST00000446897 772 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 RNA5SP61-201ENST00000516453 100 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 AC022616.4-201ENST00000522985 181 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 AC090049.2-201ENST00000550377 109 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 AC004832.4-201ENST00000608952 331 ntBASIC1.18□□□□□ -2.22
SNRNP40Q96DI7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.138-201ENST00000363462 102 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.172-201ENST00000363765 102 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 SNORD114-27-201ENST00000363766 70 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.329-201ENST00000365209 107 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 SNORA63.7-201ENST00000365579 123 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.471-201ENST00000384312 102 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 RNU6-163P-201ENST00000384396 106 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 MIR613-201ENST00000385248 95 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.711-201ENST00000516993 102 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 AL357312.1-201ENST00000603879 298 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 AC022709.1-201ENST00000615967 87 ntBASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SNRNP40Q96DI7 MIRLET7C-201ENST00000362160 84 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 RNU4-41P-201ENST00000364426 143 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 Y_RNA.331-201ENST00000365267 102 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 RNU6-937P-201ENST00000384325 106 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 SNORA25-201ENST00000384384 134 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 MIR520E-201ENST00000384867 87 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 MIR891A-201ENST00000401237 79 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 AC104332.1-201ENST00000440471 797 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 SNORA31.4-201ENST00000516049 129 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 RNA5SP480-201ENST00000516840 109 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 SNORA70.22-201ENST00000517160 124 ntBASIC1.16□□□□□ -2.22
SNRNP40Q96DI7 AC136932.1-201ENST00000574771 208 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms