Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 Y_RNA.312-201ENST00000365089 102 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 Y_RNA.322-201ENST00000365151 102 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 RN7SKP200-201ENST00000410564 320 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 RNU2-14P-201ENST00000411053 191 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 AC009310.1-201ENST00000414414 451 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 COX6CP10-201ENST00000416832 224 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 RPS27P1-201ENST00000450552 247 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 Y_RNA.650-201ENST00000459002 102 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 Y_RNA.637-201ENST00000459424 114 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 RPL23AP54-201ENST00000495129 419 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 RPL23AP63-201ENST00000498752 471 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 Y_RNA.777-201ENST00000516982 102 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.2□□□□□ -2.06
HPS3Q969F9 Y_RNA.771-201ENST00000598668 102 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 AC010900.2-201ENST00000604508 210 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 AL627230.6-201ENST00000611129 280 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 AC013791.1-201ENST00000616619 62 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 AL353997.5-201ENST00000618886 171 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 Y_RNA.789-201ENST00000622480 102 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 MIR219B-201ENST00000637023 88 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 AC100821.1-201ENST00000523153 2479 ntBASIC2.2□□□□□ -2.06
HPS3Q969F9 RNU6-1205P-201ENST00000363625 106 ntBASIC2.19□□□□□ -2.06
HPS3Q969F9 RNU6-144P-201ENST00000383951 107 ntBASIC2.19□□□□□ -2.06
HPS3Q969F9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.19□□□□□ -2.06
HPS3Q969F9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.19□□□□□ -2.06
HPS3Q969F9 AC127455.1-201ENST00000565496 145 ntBASIC2.19□□□□□ -2.06
HPS3Q969F9 MIR5692C2-201ENST00000577959 77 ntBASIC2.19□□□□□ -2.06
HPS3Q969F9 MIR8054-201ENST00000620877 86 ntBASIC2.19□□□□□ -2.06
HPS3Q969F9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.19□□□□□ -2.06
HPS3Q969F9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HPS3Q969F9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HPS3Q969F9 RNU6-211P-201ENST00000384047 107 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 Y_RNA.476-201ENST00000384347 108 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 RNU6-440P-201ENST00000390882 105 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 SNORA36B-201ENST00000410438 131 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.18□□□□□ -2.06
HPS3Q969F9 HSPE1P9-201ENST00000440046 311 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 AL606517.2-201ENST00000442855 241 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 AL049830.1-201ENST00000468034 425 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 MRPS17P9-201ENST00000511924 393 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 RNA5SP458-201ENST00000516188 119 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 RNU7-28P-201ENST00000516759 62 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 SNORA31.17-201ENST00000516953 127 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 RNA5SP437-201ENST00000517249 129 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 AC110588.1-201ENST00000559699 137 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 SNORA28-201ENST00000606769 126 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 AC073349.3-201ENST00000617616 186 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.18□□□□□ -2.06
HPS3Q969F9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.18□□□□□ -2.06
HPS3Q969F9 Y_RNA.60-201ENST00000362831 98 ntBASIC2.17□□□□□ -2.06
HPS3Q969F9 Y_RNA.122-201ENST00000363331 96 ntBASIC2.17□□□□□ -2.06
HPS3Q969F9 Y_RNA.265-201ENST00000364677 108 ntBASIC2.17□□□□□ -2.06
HPS3Q969F9 RNU6-360P-201ENST00000390944 104 ntBASIC2.17□□□□□ -2.06
HPS3Q969F9 FTH1P12-201ENST00000432137 551 ntBASIC2.17□□□□□ -2.06
HPS3Q969F9 snoU13.27-201ENST00000459278 104 ntBASIC2.17□□□□□ -2.06
HPS3Q969F9 SNORA1B-201ENST00000362535 133 ntBASIC2.16□□□□□ -2.06
HPS3Q969F9 Y_RNA.65-201ENST00000362846 100 ntBASIC2.16□□□□□ -2.06
HPS3Q969F9 Y_RNA.293-201ENST00000364908 93 ntBASIC2.16□□□□□ -2.06
HPS3Q969F9 AL034345.1-201ENST00000407768 123 ntBASIC2.16□□□□□ -2.06
HPS3Q969F9 SNORD2.1-201ENST00000458762 69 ntBASIC2.16□□□□□ -2.06
HPS3Q969F9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.16□□□□□ -2.06
HPS3Q969F9 MTND1P19-201ENST00000511780 315 ntBASIC2.16□□□□□ -2.06
HPS3Q969F9 Y_RNA.680-201ENST00000516441 93 ntBASIC2.16□□□□□ -2.06
HPS3Q969F9 MIR4709-201ENST00000577272 72 ntBASIC2.16□□□□□ -2.06
HPS3Q969F9 MIR4299-201ENST00000577899 72 ntBASIC2.16□□□□□ -2.06
HPS3Q969F9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.16□□□□□ -2.06
HPS3Q969F9 AL008718.3-201ENST00000610217 321 ntBASIC2.16□□□□□ -2.06
HPS3Q969F9 RNU6-1080P-201ENST00000383982 107 ntBASIC2.15□□□□□ -2.07
HPS3Q969F9 AL603825.1-201ENST00000438481 80 ntBASIC2.15□□□□□ -2.07
HPS3Q969F9 AC003989.2-201ENST00000440224 169 ntBASIC2.15□□□□□ -2.07
HPS3Q969F9 RNU6-437P-201ENST00000459408 95 ntBASIC2.15□□□□□ -2.07
HPS3Q969F9 MIR2681-201ENST00000581814 105 ntBASIC2.15□□□□□ -2.07
HPS3Q969F9 MIR4713-201ENST00000582691 75 ntBASIC2.15□□□□□ -2.07
HPS3Q969F9 MIR4282-201ENST00000583613 67 ntBASIC2.15□□□□□ -2.07
HPS3Q969F9 AC005357.1-201ENST00000588399 301 ntBASIC2.15□□□□□ -2.07
HPS3Q969F9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
HPS3Q969F9 RNA5SP482-201ENST00000391269 118 ntBASIC2.14□□□□□ -2.07
HPS3Q969F9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.14□□□□□ -2.07
HPS3Q969F9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HPS3Q969F9 RNU7-34P-201ENST00000459394 64 ntBASIC2.14□□□□□ -2.07
HPS3Q969F9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.14□□□□□ -2.07
HPS3Q969F9 RNU4-71P-201ENST00000516258 113 ntBASIC2.14□□□□□ -2.07
HPS3Q969F9 Y_RNA.676-201ENST00000516393 96 ntBASIC2.14□□□□□ -2.07
HPS3Q969F9 MIR4643-201ENST00000577473 78 ntBASIC2.14□□□□□ -2.07
HPS3Q969F9 AL442067.1-201ENST00000613261 223 ntBASIC2.14□□□□□ -2.07
HPS3Q969F9 RNA5SP99-201ENST00000364020 114 ntBASIC2.13□□□□□ -2.07
HPS3Q969F9 SNORA4.2-201ENST00000365313 147 ntBASIC2.13□□□□□ -2.07
HPS3Q969F9 SNORD58.1-201ENST00000391313 66 ntBASIC2.13□□□□□ -2.07
HPS3Q969F9 RNU6-651P-201ENST00000411040 105 ntBASIC2.13□□□□□ -2.07
HPS3Q969F9 STAG3L5P-204ENST00000443759 179 ntBASIC2.13□□□□□ -2.07
HPS3Q969F9 SNORA31.10-201ENST00000516482 106 ntBASIC2.13□□□□□ -2.07
HPS3Q969F9 Y_RNA.714-201ENST00000517065 90 ntBASIC2.13□□□□□ -2.07
HPS3Q969F9 AL929325.1-201ENST00000603096 117 ntBASIC2.13□□□□□ -2.07
HPS3Q969F9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HPS3Q969F9 MIR367-201ENST00000362299 68 ntBASIC2.12□□□□□ -2.07
HPS3Q969F9 RNU6-414P-201ENST00000363705 104 ntBASIC2.12□□□□□ -2.07
HPS3Q969F9 RNU6-674P-201ENST00000363831 107 ntBASIC2.12□□□□□ -2.07
HPS3Q969F9 Y_RNA.203-201ENST00000364106 102 ntBASIC2.12□□□□□ -2.07
HPS3Q969F9 Y_RNA.292-201ENST00000364904 97 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms