Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 COX6CP14-201ENST00000469580 174 ntBASIC0.65□□□□□ -2.31
UFD1Q92890 AC108729.3-201ENST00000513484 108 ntBASIC0.65□□□□□ -2.31
UFD1Q92890 RNU6-911P-201ENST00000516523 104 ntBASIC0.65□□□□□ -2.31
UFD1Q92890 RNU7-43P-201ENST00000516554 64 ntBASIC0.65□□□□□ -2.31
UFD1Q92890 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.65□□□□□ -2.31
UFD1Q92890 RNA5SP48-201ENST00000363969 126 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 Y_RNA.314-201ENST00000365114 102 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 RNU6-1297P-201ENST00000384415 104 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 RNU6-131P-201ENST00000391144 107 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 AL390729.2-201ENST00000416137 156 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 AL035398.1-201ENST00000430869 322 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 Y_RNA.653-201ENST00000459091 95 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 RN7SKP164-201ENST00000516138 266 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 RNU6-559P-201ENST00000516151 98 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 AC023827.1-201ENST00000569247 97 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 AC131055.1-201ENST00000584626 316 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 RBM11P1-201ENST00000604951 799 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 AC113139.1-201ENST00000605049 239 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 AC022441.3-201ENST00000605737 136 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 AC092794.1-201ENST00000612734 582 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 AC133104.2-201ENST00000615272 193 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 AC138305.3-201ENST00000624988 240 ntBASIC0.64□□□□□ -2.31
UFD1Q92890 SNORD50B-201ENST00000364995 70 ntBASIC0.63□□□□□ -2.31
UFD1Q92890 MCFD2P1-201ENST00000417812 300 ntBASIC0.63□□□□□ -2.31
UFD1Q92890 SNRPGP10-201ENST00000432323 225 ntBASIC0.63□□□□□ -2.31
UFD1Q92890 AC109810.1-201ENST00000534066 224 ntBASIC0.63□□□□□ -2.31
UFD1Q92890 AL353765.1-201ENST00000605514 183 ntBASIC0.63□□□□□ -2.31
UFD1Q92890 snoU13.31-201ENST00000607291 104 ntBASIC0.63□□□□□ -2.31
UFD1Q92890 U6.92-201ENST00000636464 89 ntBASIC0.63□□□□□ -2.31
UFD1Q92890 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
UFD1Q92890 Y_RNA.27-201ENST00000362540 103 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 Y_RNA.329-201ENST00000365209 107 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 RNU6-708P-201ENST00000384217 107 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 MIR559-201ENST00000385188 96 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 RNU6-710P-201ENST00000410424 105 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 RPS26P5-201ENST00000418544 335 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 AC099799.1-201ENST00000439809 192 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.62□□□□□ -2.31
UFD1Q92890 SNORD123-201ENST00000459473 70 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 Y_RNA.714-201ENST00000517065 90 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 RN7SKP295-201ENST00000517264 153 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 AC025253.1-201ENST00000613623 543 ntBASIC0.62□□□□□ -2.31
UFD1Q92890 AL442644.1-201ENST00000454390 3105 ntBASIC0.61□□□□□ -2.31
UFD1Q92890 RNU6-490P-201ENST00000362985 107 ntBASIC0.61□□□□□ -2.31
UFD1Q92890 Y_RNA.338-201ENST00000365320 114 ntBASIC0.61□□□□□ -2.31
UFD1Q92890 RNU6-1335P-201ENST00000365426 107 ntBASIC0.61□□□□□ -2.31
UFD1Q92890 RNU6-855P-201ENST00000410395 104 ntBASIC0.61□□□□□ -2.31
UFD1Q92890 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
UFD1Q92890 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.61□□□□□ -2.31
UFD1Q92890 AC096644.2-201ENST00000429278 159 ntBASIC0.61□□□□□ -2.31
UFD1Q92890 TRMT112P2-201ENST00000512910 132 ntBASIC0.61□□□□□ -2.31
UFD1Q92890 AC104465.1-201ENST00000611365 139 ntBASIC0.61□□□□□ -2.31
UFD1Q92890 SNORD114-27-201ENST00000363766 70 ntBASIC0.6□□□□□ -2.31
UFD1Q92890 RNU6-1175P-201ENST00000365200 107 ntBASIC0.6□□□□□ -2.31
UFD1Q92890 Y_RNA.368-201ENST00000365547 113 ntBASIC0.6□□□□□ -2.31
UFD1Q92890 RNU6-1323P-201ENST00000384025 107 ntBASIC0.6□□□□□ -2.31
UFD1Q92890 Y_RNA.570-201ENST00000384750 101 ntBASIC0.6□□□□□ -2.31
UFD1Q92890 Y_RNA.619-201ENST00000410951 90 ntBASIC0.6□□□□□ -2.31
UFD1Q92890 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.6□□□□□ -2.31
UFD1Q92890 U7.7-201ENST00000459276 60 ntBASIC0.6□□□□□ -2.31
UFD1Q92890 AC117454.1-201ENST00000491120 168 ntBASIC0.6□□□□□ -2.31
UFD1Q92890 AC113410.1-201ENST00000505029 247 ntBASIC0.6□□□□□ -2.31
UFD1Q92890 RNU6-53P-201ENST00000365367 106 ntBASIC0.59□□□□□ -2.31
UFD1Q92890 SNORD89-201ENST00000390981 114 ntBASIC0.59□□□□□ -2.31
UFD1Q92890 AC005042.3-201ENST00000453230 174 ntBASIC0.59□□□□□ -2.31
UFD1Q92890 RNU11-2P-201ENST00000516898 142 ntBASIC0.59□□□□□ -2.31
UFD1Q92890 RNU7-116P-201ENST00000516940 62 ntBASIC0.59□□□□□ -2.31
UFD1Q92890 RNU6-699P-201ENST00000517081 110 ntBASIC0.59□□□□□ -2.31
UFD1Q92890 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.59□□□□□ -2.31
UFD1Q92890 VN1R91P-201ENST00000594377 169 ntBASIC0.59□□□□□ -2.31
UFD1Q92890 AL359821.1-201ENST00000605519 182 ntBASIC0.59□□□□□ -2.31
UFD1Q92890 AC108706.1-201ENST00000611053 297 ntBASIC0.59□□□□□ -2.31
UFD1Q92890 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.59□□□□□ -2.31
UFD1Q92890 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
UFD1Q92890 AC023934.1-201ENST00000574529 2389 ntBASIC0.59□□□□□ -2.32
UFD1Q92890 AC134026.1-201ENST00000623249 2239 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 SNORD14E-201ENST00000364009 85 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 Y_RNA.310-201ENST00000365063 113 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 Y_RNA.341-201ENST00000365341 102 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 AC098614.3-201ENST00000438957 440 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.58□□□□□ -2.32
UFD1Q92890 AL392103.1-201ENST00000447000 198 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 COX6CP6-201ENST00000490840 228 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.58□□□□□ -2.32
UFD1Q92890 AC036111.3-201ENST00000526389 112 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 AC006600.1-201ENST00000572529 153 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 MIR3973-201ENST00000579824 107 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 MIR4423-201ENST00000580922 80 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 AC025627.3-201ENST00000582078 182 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 POLR3GP1-201ENST00000594073 261 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 RNU6-94P-201ENST00000607728 107 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.58□□□□□ -2.32
UFD1Q92890 AC008133.2-201ENST00000624540 351 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 MTND4LP32-201ENST00000636111 270 ntBASIC0.58□□□□□ -2.32
UFD1Q92890 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.58□□□□□ -2.32
UFD1Q92890 Y_RNA.259-201ENST00000364619 101 ntBASIC0.57□□□□□ -2.32
UFD1Q92890 RNU6-1040P-201ENST00000383974 107 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms