Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RNU6-211P-201ENST00000384047 107 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 RNU11-5P-201ENST00000391216 129 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 AL355497.1-201ENST00000406262 551 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 MIR1287-201ENST00000408492 90 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 RNA5SP511-201ENST00000410487 115 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 BTF3P11-201ENST00000426582 477 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 AC104332.1-201ENST00000440471 797 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 COX6CP14-201ENST00000469580 174 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 TRMT112P2-201ENST00000512910 132 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 RNU1-142P-201ENST00000516682 145 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 RNU6-63P-201ENST00000516690 95 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 MIR4529-201ENST00000578110 78 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 AP003357.1-201ENST00000604497 148 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 AL442067.1-201ENST00000613261 223 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 AC073349.3-201ENST00000617616 186 ntBASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
RAPGEF4Q8WZA2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 Y_RNA.65-201ENST00000362846 100 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 RNY1P10-201ENST00000363268 113 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 RNU6-899P-201ENST00000363947 107 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 RNA5SP138-201ENST00000365098 114 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 RNY4P28-201ENST00000365281 93 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 SNORA48.1-201ENST00000390879 135 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 RNU6-1186P-201ENST00000410429 97 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 RNA5SP450-201ENST00000411206 102 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 U8.19-201ENST00000459095 133 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 RNU7-95P-201ENST00000459222 64 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 RNU7-141P-201ENST00000459304 62 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 AP005660.1-201ENST00000522972 293 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 AC013791.1-201ENST00000616619 62 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.21□□□□□ -2.06
RAPGEF4Q8WZA2 Y_RNA.292-201ENST00000364904 97 ntBASIC2.2□□□□□ -2.06
RAPGEF4Q8WZA2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.2□□□□□ -2.06
RAPGEF4Q8WZA2 Y_RNA.679-201ENST00000516416 91 ntBASIC2.2□□□□□ -2.06
RAPGEF4Q8WZA2 RNU7-115P-201ENST00000516433 55 ntBASIC2.2□□□□□ -2.06
RAPGEF4Q8WZA2 RNU7-116P-201ENST00000516940 62 ntBASIC2.2□□□□□ -2.06
RAPGEF4Q8WZA2 RNU2-19P-201ENST00000517288 84 ntBASIC2.2□□□□□ -2.06
RAPGEF4Q8WZA2 CBX3P4-201ENST00000538909 354 ntBASIC2.2□□□□□ -2.06
RAPGEF4Q8WZA2 AC091178.2-201ENST00000584401 117 ntBASIC2.2□□□□□ -2.06
RAPGEF4Q8WZA2 AC073413.2-201ENST00000604332 360 ntBASIC2.2□□□□□ -2.06
RAPGEF4Q8WZA2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.2□□□□□ -2.06
RAPGEF4Q8WZA2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
RAPGEF4Q8WZA2 RNU6-1048P-201ENST00000364054 107 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 RNU6-1019P-201ENST00000364424 107 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 U8.7-201ENST00000364940 136 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 Y_RNA.515-201ENST00000384535 112 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 RNU6-376P-201ENST00000384731 106 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 SNORD116-28-201ENST00000516123 91 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 MIR5692C2-201ENST00000577959 77 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 MIR3618-201ENST00000580330 88 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 AC069114.2-201ENST00000604699 304 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 MIR548AY-201ENST00000617669 107 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 AC068647.2-201ENST00000637380 353 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 AC018630.2-201ENST00000534866 2403 ntBASIC2.19□□□□□ -2.06
RAPGEF4Q8WZA2 Y_RNA.304-201ENST00000365011 112 ntBASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 SNORA8-201ENST00000384574 139 ntBASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 MIR520G-201ENST00000385064 90 ntBASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 AC245047.4-201ENST00000433189 144 ntBASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 AC055731.1-201ENST00000474387 401 ntBASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 AL163195.1-201ENST00000496941 348 ntBASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 RNVU1-2-201ENST00000516326 135 ntBASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 AC127455.1-201ENST00000565496 145 ntBASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 SUB1P4-201ENST00000566062 339 ntBASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 SNORD53B-201ENST00000577887 78 ntBASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.18□□□□□ -2.06
RAPGEF4Q8WZA2 RNU6-144P-201ENST00000383951 107 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 SNORA72-201ENST00000384339 132 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 RNA5SP323-201ENST00000391094 133 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 MTCO2P33-201ENST00000402100 465 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 RNA5SP501-201ENST00000410990 112 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 HSPE1P21-201ENST00000438283 308 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 RPS4XP11-201ENST00000446897 772 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 RNU7-94P-201ENST00000459576 63 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 AC024405.2-202ENST00000532731 184 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 AC084364.2-201ENST00000546924 395 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 POLR3GP1-201ENST00000594073 261 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 AL645939.4-201ENST00000604495 135 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 AC090425.1-201ENST00000610007 140 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 MIR8070-201ENST00000616510 88 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 U1.36-201ENST00000620684 176 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 MIR6079-201ENST00000635807 62 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 AC068700.1-201ENST00000565862 3754 ntBASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RAPGEF4Q8WZA2 AC100821.1-201ENST00000523153 2479 ntBASIC2.16□□□□□ -2.06
RAPGEF4Q8WZA2 Y_RNA.200-201ENST00000364018 102 ntBASIC2.16□□□□□ -2.06
RAPGEF4Q8WZA2 RNU4-13P-201ENST00000364019 141 ntBASIC2.16□□□□□ -2.06
RAPGEF4Q8WZA2 MIR562-201ENST00000384894 95 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms