Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MIR3616-201ENST00000584070 92 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 MIR4769-201ENST00000584126 77 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 POLR3GP1-201ENST00000594073 261 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 AL355297.2-201ENST00000604792 129 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.94□□□□□ -2.1
LMO3Q8TAP4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
LMO3Q8TAP4 CENPCP1-201ENST00000533085 2578 ntBASIC1.94□□□□□ -2.1
LMO3Q8TAP4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LMO3Q8TAP4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LMO3Q8TAP4 RNU6-674P-201ENST00000363831 107 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 RNU6-743P-201ENST00000364151 106 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 Y_RNA.229-201ENST00000364347 113 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 RNU6-407P-201ENST00000365280 104 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 Y_RNA.357-201ENST00000365487 109 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 RNU6-81P-201ENST00000365608 104 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 RNU6-1228P-201ENST00000391014 107 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 RNU2-63P-201ENST00000410792 194 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.93□□□□□ -2.1
LMO3Q8TAP4 snoU13.15-201ENST00000459407 104 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 RNU6-63P-201ENST00000516690 95 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 RNU6-856P-201ENST00000516959 98 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 AC027419.1-201ENST00000522976 328 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.93□□□□□ -2.1
LMO3Q8TAP4 AC015720.1-201ENST00000565251 277 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 AC127455.1-201ENST00000565496 145 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 MIR4724-201ENST00000579485 89 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 AL391903.3-201ENST00000612158 163 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 AC132825.6-201ENST00000638861 357 ntBASIC1.93□□□□□ -2.1
LMO3Q8TAP4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LMO3Q8TAP4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LMO3Q8TAP4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.93□□□□□ -2.1
LMO3Q8TAP4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LMO3Q8TAP4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LMO3Q8TAP4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
LMO3Q8TAP4 RNU1-22P-201ENST00000363334 158 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 RNU1-96P-201ENST00000364163 162 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 RNU6-449P-201ENST00000383914 107 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 SNORA6-201ENST00000384033 151 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 SNORA19-201ENST00000384737 128 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 MT-TT-201ENST00000387460 66 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 AC019129.1-201ENST00000403786 261 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 RNU6-383P-201ENST00000410864 94 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 AC060773.1-201ENST00000421698 310 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 TMSB4XP3-201ENST00000445144 114 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 CKS1BP2-201ENST00000497342 240 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.92□□□□□ -2.1
LMO3Q8TAP4 AC109810.1-201ENST00000534066 224 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 U6.73-201ENST00000619194 103 ntBASIC1.92□□□□□ -2.1
LMO3Q8TAP4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LMO3Q8TAP4 RNU6-818P-201ENST00000364837 108 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 RNA5SP125-201ENST00000364843 120 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 SNORA25B-201ENST00000365507 128 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 Y_RNA.400-201ENST00000383963 111 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 AL445685.2-201ENST00000422551 342 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 AC010154.1-201ENST00000425857 269 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 AC245047.8-201ENST00000456455 284 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.91□□□□□ -2.1
LMO3Q8TAP4 SNORA4.4-201ENST00000515921 135 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 RNU6-991P-201ENST00000516168 107 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 RNU6-561P-201ENST00000516222 102 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.91□□□□□ -2.1
LMO3Q8TAP4 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 MTND1P7-201ENST00000632801 297 ntBASIC1.91□□□□□ -2.1
LMO3Q8TAP4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LMO3Q8TAP4 AL596028.1-201ENST00000326971 197 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 SNORD116-18-201ENST00000383961 92 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 RNY3P5-201ENST00000384127 102 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 AL606845.1-201ENST00000404881 255 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 MIR548I2-201ENST00000408348 149 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 SRIP3-201ENST00000413200 219 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 AL606753.1-201ENST00000427435 87 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 AL445687.1-201ENST00000439946 251 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.9□□□□□ -2.11
LMO3Q8TAP4 RPS27P22-201ENST00000478056 241 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.9□□□□□ -2.11
LMO3Q8TAP4 RNU6-667P-201ENST00000517186 102 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 NDUFA5P6-201ENST00000542110 379 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.9□□□□□ -2.11
LMO3Q8TAP4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.9□□□□□ -2.11
LMO3Q8TAP4 DEFB122-202ENST00000569013 197 ntBASIC1.9□□□□□ -2.11
LMO3Q8TAP4 AC131280.1-202ENST00000624067 4211 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 Y_RNA.215-201ENST00000364204 112 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 SNORD114-6-201ENST00000364393 72 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 SNORA72-201ENST00000384339 132 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 MIR524-201ENST00000385242 87 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 SNORA40.18-201ENST00000391200 128 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 RNA5SP496-201ENST00000391240 109 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 RNU4-43P-201ENST00000410628 137 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 RN7SKP101-201ENST00000411376 320 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 SNRPGP8-201ENST00000454064 226 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 RNU6-437P-201ENST00000459408 95 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 AC097462.1-201ENST00000514125 324 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 MIR4438-201ENST00000585271 93 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 AP001485.1-201ENST00000604799 199 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 Y_RNA.778-201ENST00000620203 90 ntBASIC1.89□□□□□ -2.11
LMO3Q8TAP4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.89□□□□□ -2.11
LMO3Q8TAP4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LMO3Q8TAP4 MIR367-201ENST00000362299 68 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms