Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
NEDD1Q8NHV4 FAM35BP-202ENST00000497389 3337 ntBASIC3.5□□□□□ -1.85
NEDD1Q8NHV4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.5□□□□□ -1.85
NEDD1Q8NHV4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 Y_RNA.94-201ENST00000363068 106 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 SNORA80A-201ENST00000363922 136 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 RNU6-743P-201ENST00000364151 106 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 RNU6-418P-201ENST00000384035 107 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 Y_RNA.426-201ENST00000384068 113 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 MIR605-201ENST00000385078 83 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 MRPL35P3-201ENST00000421557 364 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 RNU2-11P-201ENST00000459191 187 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 AP001486.1-201ENST00000463339 476 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 HMGN1P7-201ENST00000491722 313 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 RNU6-1096P-201ENST00000517089 102 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 MIR4668-201ENST00000582284 70 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 AL110115.1-201ENST00000614396 364 ntBASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
NEDD1Q8NHV4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 Y_RNA.253-201ENST00000364562 112 ntBASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 Y_RNA.454-201ENST00000384224 113 ntBASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 AL049873.1-201ENST00000480540 376 ntBASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 SNORD59.2-201ENST00000516873 68 ntBASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 HSPE1P19-201ENST00000603327 295 ntBASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 AC006111.3-201ENST00000622137 383 ntBASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 AC006386.2-201ENST00000624491 75 ntBASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 AC012005.1-201ENST00000624575 75 ntBASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
NEDD1Q8NHV4 AC010889.1-201ENST00000566193 2666 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 SNORA14A-201ENST00000364773 135 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 RNU6-805P-201ENST00000365643 106 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 RNA5SP274-201ENST00000410484 108 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 COTL1P1-201ENST00000422309 375 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 AC022018.1-201ENST00000430685 241 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 snoU13.28-201ENST00000459235 104 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 RPS27P29-201ENST00000463110 252 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 AC079598.5-201ENST00000547460 117 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 AL137790.1-201ENST00000634283 177 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 AC096644.4-201ENST00000563417 2912 ntBASIC3.47□□□□□ -1.85
NEDD1Q8NHV4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.4-201ENST00000362333 112 ntBASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 RNU6-363P-201ENST00000362895 105 ntBASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.410-201ENST00000383992 113 ntBASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 RNU6-1235P-201ENST00000384559 107 ntBASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 RNU6-851P-201ENST00000384565 107 ntBASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 RNU6-498P-201ENST00000459468 107 ntBASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 RNU6-948P-201ENST00000516374 107 ntBASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 AC002984.1-201ENST00000591692 448 ntBASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 AC013412.1-201ENST00000610687 192 ntBASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 AC002076.2-201ENST00000617362 122 ntBASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NEDD1Q8NHV4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 SNORD115-19-201ENST00000363098 82 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 SNORD115-18-201ENST00000363293 82 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 RNU1-96P-201ENST00000364163 162 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 SNORD115-17-201ENST00000364612 82 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 RNU6-1189P-201ENST00000383958 107 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.467-201ENST00000384297 102 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.507-201ENST00000384500 99 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 MIR147B-201ENST00000390185 80 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 RNA5SP293-201ENST00000410527 113 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.611-201ENST00000410682 108 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 RNU1-131P-201ENST00000458943 161 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 MIR3683-201ENST00000580847 82 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 AC073413.2-201ENST00000604332 360 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 SNORA50A-202ENST00000629536 136 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 AC095038.3-201ENST00000634439 195 ntBASIC3.45□□□□□ -1.86
NEDD1Q8NHV4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.191-201ENST00000363972 113 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 RNU6-1229P-201ENST00000364295 107 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 SNORD31B-201ENST00000364977 69 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 RNU6-234P-201ENST00000365229 104 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 RNY1P4-201ENST00000384595 115 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 SNORA46-201ENST00000384762 135 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 RNU6-733P-201ENST00000410759 104 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 AL135938.1-201ENST00000443141 297 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 AL441985.1-201ENST00000457727 251 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 SNORD36C-201ENST00000516733 66 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms