Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.84□□□□□ -2.11
USP38Q8NB14 AC098869.1-201ENST00000481627 292 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 SNORA31.10-201ENST00000516482 106 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 RNU6-1096P-201ENST00000517089 102 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.84□□□□□ -2.11
USP38Q8NB14 CBX3P4-201ENST00000538909 354 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 MIR4285-201ENST00000581001 85 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.84□□□□□ -2.11
USP38Q8NB14 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.84□□□□□ -2.11
USP38Q8NB14 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.84□□□□□ -2.11
USP38Q8NB14 Y_RNA.64-201ENST00000362845 102 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 RNU6-117P-201ENST00000365415 107 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 Y_RNA.361-201ENST00000365515 120 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 RNU6-102P-201ENST00000384485 104 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 MIR606-201ENST00000384851 96 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 SNORD115-46-201ENST00000390982 71 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 HSPE1P13-201ENST00000451143 297 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 LINC01399-202ENST00000458450 244 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 AC005908.1-201ENST00000468701 347 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 AC092991.1-201ENST00000477176 376 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 AC008834.1-201ENST00000511612 175 ntBASIC1.83□□□□□ -2.12
USP38Q8NB14 MIR424-201ENST00000362227 98 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 Y_RNA.26-201ENST00000362539 101 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 Y_RNA.30-201ENST00000362572 97 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 Y_RNA.341-201ENST00000365341 102 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 MIR520G-201ENST00000385064 90 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 RNU6-121P-201ENST00000410525 99 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 HSPE1P21-201ENST00000438283 308 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 JTBP1-201ENST00000441314 247 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 MTATP8P1-201ENST00000467115 207 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.82□□□□□ -2.12
USP38Q8NB14 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.82□□□□□ -2.12
USP38Q8NB14 AC015720.1-201ENST00000565251 277 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.82□□□□□ -2.12
USP38Q8NB14 AL157834.3-201ENST00000615543 103 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 MIR8063-201ENST00000621930 81 ntBASIC1.82□□□□□ -2.12
USP38Q8NB14 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
USP38Q8NB14 RNU4-90P-201ENST00000362773 141 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 RNU4-80P-201ENST00000363200 141 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 RNU6-203P-201ENST00000384038 104 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 MIR598-201ENST00000384868 97 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 MIR934-201ENST00000401241 83 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 AL034345.1-201ENST00000407768 123 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 RPL21P38-201ENST00000418090 167 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 snoU13.9-201ENST00000458927 103 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 RNU6-341P-201ENST00000516973 96 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 SNORD53B-201ENST00000577887 78 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 AC091895.1-201ENST00000624494 256 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 AC068647.2-201ENST00000637380 353 ntBASIC1.81□□□□□ -2.12
USP38Q8NB14 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
USP38Q8NB14 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
USP38Q8NB14 RNU6-238P-201ENST00000363313 106 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 RNU6-60P-201ENST00000364792 103 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 RNU6-1160P-201ENST00000384546 104 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 RNU6-1031P-201ENST00000384773 107 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 MIR215-201ENST00000384858 110 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 MIR562-201ENST00000384894 95 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 AL162725.1-201ENST00000435405 301 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 HSPE1P24-201ENST00000450782 238 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 RNU6-496P-201ENST00000516145 99 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 Y_RNA.720-201ENST00000517166 92 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 AP003733.2-201ENST00000529409 171 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.8□□□□□ -2.12
USP38Q8NB14 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.8□□□□□ -2.12
USP38Q8NB14 AC091178.2-201ENST00000584401 117 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 AC008737.2-201ENST00000599446 118 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 AC004832.4-201ENST00000608952 331 ntBASIC1.8□□□□□ -2.12
USP38Q8NB14 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
USP38Q8NB14 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USP38Q8NB14 SNORA1B-201ENST00000362535 133 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 RNA5SP363-201ENST00000365072 115 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 Y_RNA.569-201ENST00000384749 103 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 DYNLT3P2-201ENST00000442517 295 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 RPS20P10-201ENST00000451209 253 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 HSPE1P25-201ENST00000455484 251 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 AL049830.1-201ENST00000468034 425 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 RNU6-1143P-201ENST00000516125 104 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 RNU6-635P-201ENST00000516651 102 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 AP002004.2-201ENST00000531656 154 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 MIR3198-2-201ENST00000577868 80 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 MIR4421-201ENST00000578133 69 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 AC021506.2-201ENST00000612354 169 ntBASIC1.79□□□□□ -2.12
USP38Q8NB14 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USP38Q8NB14 ICE2P2-201ENST00000483823 2787 ntBASIC1.78□□□□□ -2.12
USP38Q8NB14 RNU6-1080P-201ENST00000383982 107 ntBASIC1.78□□□□□ -2.12
USP38Q8NB14 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.78□□□□□ -2.12
USP38Q8NB14 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.78□□□□□ -2.12
USP38Q8NB14 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.78□□□□□ -2.12
USP38Q8NB14 RNU6-970P-201ENST00000516312 107 ntBASIC1.78□□□□□ -2.12
USP38Q8NB14 RNU6-570P-201ENST00000517051 105 ntBASIC1.78□□□□□ -2.12
USP38Q8NB14 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.78□□□□□ -2.12
USP38Q8NB14 AC005972.2-201ENST00000604690 348 ntBASIC1.78□□□□□ -2.12
USP38Q8NB14 SNORA28-201ENST00000606769 126 ntBASIC1.78□□□□□ -2.12
USP38Q8NB14 Y_RNA.222-201ENST00000364264 102 ntBASIC1.77□□□□□ -2.13
USP38Q8NB14 RNU6-713P-201ENST00000384761 107 ntBASIC1.77□□□□□ -2.13
USP38Q8NB14 Y_RNA.581-201ENST00000391017 97 ntBASIC1.77□□□□□ -2.13
USP38Q8NB14 AC037487.3-201ENST00000606668 112 ntBASIC1.77□□□□□ -2.13
USP38Q8NB14 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.77□□□□□ -2.13
USP38Q8NB14 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms