Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-484P-201ENST00000384016 107 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 Y_RNA.420-201ENST00000384043 110 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 SNORA72-201ENST00000384339 132 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 RNA5SP496-201ENST00000391240 109 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-735P-201ENST00000410612 107 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 AC123900.1-201ENST00000420390 96 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 AC092991.1-201ENST00000477176 376 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-62P-201ENST00000516526 102 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 AC112693.2-201ENST00000556538 232 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 MIR3646-201ENST00000578301 84 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 MIR5194-201ENST00000582634 120 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 AL929325.1-201ENST00000603096 117 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 FO624990.1-201ENST00000636373 85 ntBASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC44A3Q8N4M1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 Y_RNA.251-201ENST00000364551 99 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 Y_RNA.393-201ENST00000383936 102 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 RNU1-138P-201ENST00000384093 164 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 SNORA67.3-201ENST00000384366 140 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 SNORA20-201ENST00000384662 132 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-417P-201ENST00000384712 107 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-1154P-201ENST00000391001 104 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 RPS4XP11-201ENST00000446897 772 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 SNRPGP8-201ENST00000454064 226 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 RPS27P22-201ENST00000478056 241 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-313P-201ENST00000516317 112 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 RNA5SP402-201ENST00000517148 110 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 MIR3117-201ENST00000584034 78 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 MIR4438-201ENST00000585271 93 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 AC067747.1-201ENST00000608026 250 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 MIR219B-201ENST00000637023 88 ntBASIC2.36□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-1290P-201ENST00000362957 109 ntBASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 RNA5SP393-201ENST00000363423 117 ntBASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 Y_RNA.164-201ENST00000363709 102 ntBASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-461P-201ENST00000364195 107 ntBASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 MIR513C-201ENST00000401352 84 ntBASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 AC060773.1-201ENST00000421698 310 ntBASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 AC010154.1-201ENST00000425857 269 ntBASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 AC018634.1-201ENST00000437554 401 ntBASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 CYP2C59P-201ENST00000457790 269 ntBASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-971P-201ENST00000516920 106 ntBASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 RNU7-128P-201ENST00000517247 62 ntBASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
SLC44A3Q8N4M1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-743P-201ENST00000364151 106 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-978P-201ENST00000364371 103 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-597P-201ENST00000365620 102 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 Y_RNA.542-201ENST00000384641 111 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 RNA5SP181-201ENST00000410246 98 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 Y_RNA.622-201ENST00000411091 108 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 RPS15AP28-201ENST00000435088 386 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 RPS27P1-201ENST00000450552 247 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 SNORD11-201ENST00000459124 84 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 AL160236.1-201ENST00000556317 195 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 AC120024.3-201ENST00000603167 156 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 U6.73-201ENST00000619194 103 ntBASIC2.34□□□□□ -2.03
SLC44A3Q8N4M1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
SLC44A3Q8N4M1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SLC44A3Q8N4M1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 AC092881.1-201ENST00000638218 2733 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 RNU1-96P-201ENST00000364163 162 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 RNU4-41P-201ENST00000364426 143 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 RNA5SP205-201ENST00000364653 136 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.338-201ENST00000365320 114 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-460P-201ENST00000391158 108 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 HMGN2P34-201ENST00000437647 269 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 AC008267.6-201ENST00000441664 139 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-197P-201ENST00000516680 100 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 RNU7-172P-201ENST00000517125 64 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 MIR4446-201ENST00000578505 67 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 AC097639.2-201ENST00000603159 172 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 MIR7111-201ENST00000619751 72 ntBASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.33□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.71-201ENST00000362892 104 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-199P-201ENST00000362954 107 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.127-201ENST00000363386 109 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 RNU4-13P-201ENST00000364019 141 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.203-201ENST00000364106 102 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.796-201ENST00000364268 102 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-1082P-201ENST00000364574 107 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.261-201ENST00000364631 102 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.799-201ENST00000364992 102 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 SNORD116-14-201ENST00000383894 92 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 SNORD116-17-201ENST00000383929 92 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 SNORD116-15-201ENST00000384445 92 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 SNORD116-19-201ENST00000384729 92 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 MIR562-201ENST00000384894 95 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.587-201ENST00000391210 103 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 251.8 ms