Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
PROM2Q8N271 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.74□□□□□ -1.65
PROM2Q8N271 RPS29P12-201ENST00000460178 152 ntBASIC4.74□□□□□ -1.65
PROM2Q8N271 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.74□□□□□ -1.65
PROM2Q8N271 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PROM2Q8N271 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PROM2Q8N271 SNORA32-201ENST00000384072 121 ntBASIC4.73□□□□□ -1.65
PROM2Q8N271 Y_RNA.494-201ENST00000384432 111 ntBASIC4.73□□□□□ -1.65
PROM2Q8N271 RNU6-950P-201ENST00000384651 107 ntBASIC4.73□□□□□ -1.65
PROM2Q8N271 SNORD17-201ENST00000390930 237 ntBASIC4.73□□□□□ -1.65
PROM2Q8N271 AL034345.1-201ENST00000407768 123 ntBASIC4.73□□□□□ -1.65
PROM2Q8N271 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.73□□□□□ -1.65
PROM2Q8N271 MIR376B-201ENST00000614515 100 ntBASIC4.73□□□□□ -1.65
PROM2Q8N271 uc_338.32-201ENST00000615087 172 ntBASIC4.73□□□□□ -1.65
PROM2Q8N271 MIR548BB-201ENST00000626714 66 ntBASIC4.73□□□□□ -1.65
PROM2Q8N271 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PROM2Q8N271 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.73□□□□□ -1.65
PROM2Q8N271 MAPK10-362ENST00000641864 4484 ntBASIC4.72□□□□□ -1.65
PROM2Q8N271 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PROM2Q8N271 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PROM2Q8N271 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM2Q8N271 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PROM2Q8N271 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PROM2Q8N271 RNU6-509P-201ENST00000363519 107 ntBASIC4.72□□□□□ -1.65
PROM2Q8N271 RNA5SP493-201ENST00000364115 91 ntBASIC4.72□□□□□ -1.65
PROM2Q8N271 Y_RNA.470-201ENST00000384307 117 ntBASIC4.72□□□□□ -1.65
PROM2Q8N271 MIR591-201ENST00000385290 95 ntBASIC4.72□□□□□ -1.65
PROM2Q8N271 AC069257.2-201ENST00000441819 155 ntBASIC4.72□□□□□ -1.65
PROM2Q8N271 AC018868.1-201ENST00000491307 315 ntBASIC4.72□□□□□ -1.65
PROM2Q8N271 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.72□□□□□ -1.65
PROM2Q8N271 MIR4672-201ENST00000583126 81 ntBASIC4.72□□□□□ -1.65
PROM2Q8N271 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PROM2Q8N271 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PROM2Q8N271 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.71□□□□□ -1.65
PROM2Q8N271 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PROM2Q8N271 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
PROM2Q8N271 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PROM2Q8N271 Y_RNA.191-201ENST00000363972 113 ntBASIC4.71□□□□□ -1.66
PROM2Q8N271 SNORD6-201ENST00000365444 73 ntBASIC4.71□□□□□ -1.66
PROM2Q8N271 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.71□□□□□ -1.66
PROM2Q8N271 AL606517.2-201ENST00000442855 241 ntBASIC4.71□□□□□ -1.66
PROM2Q8N271 AC103810.7-201ENST00000607821 91 ntBASIC4.71□□□□□ -1.66
PROM2Q8N271 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PROM2Q8N271 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.7□□□□□ -1.66
PROM2Q8N271 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.7□□□□□ -1.66
PROM2Q8N271 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PROM2Q8N271 RPS29P28-201ENST00000446439 141 ntBASIC4.7□□□□□ -1.66
PROM2Q8N271 SNORA70.19-201ENST00000516717 90 ntBASIC4.7□□□□□ -1.66
PROM2Q8N271 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC4.7□□□□□ -1.66
PROM2Q8N271 AC069114.2-201ENST00000604699 304 ntBASIC4.7□□□□□ -1.66
PROM2Q8N271 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PROM2Q8N271 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PROM2Q8N271 COTL1P1-201ENST00000422309 375 ntBASIC4.69□□□□□ -1.66
PROM2Q8N271 RPS29P29-201ENST00000456396 171 ntBASIC4.69□□□□□ -1.66
PROM2Q8N271 AC025554.1-201ENST00000505641 188 ntBASIC4.69□□□□□ -1.66
PROM2Q8N271 SNORA31.4-201ENST00000516049 129 ntBASIC4.69□□□□□ -1.66
PROM2Q8N271 RNA5SP208-201ENST00000516156 78 ntBASIC4.69□□□□□ -1.66
PROM2Q8N271 RNU6-1258P-201ENST00000516911 111 ntBASIC4.69□□□□□ -1.66
PROM2Q8N271 RNU6-86P-201ENST00000606534 107 ntBASIC4.69□□□□□ -1.66
PROM2Q8N271 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC4.69□□□□□ -1.66
PROM2Q8N271 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PROM2Q8N271 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.69□□□□□ -1.66
PROM2Q8N271 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PROM2Q8N271 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PROM2Q8N271 RNU6-833P-201ENST00000363486 107 ntBASIC4.68□□□□□ -1.66
PROM2Q8N271 SNORD38.1-201ENST00000363863 68 ntBASIC4.68□□□□□ -1.66
PROM2Q8N271 MIR452-201ENST00000385020 85 ntBASIC4.68□□□□□ -1.66
PROM2Q8N271 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PROM2Q8N271 Y_RNA.609-201ENST00000410669 89 ntBASIC4.68□□□□□ -1.66
PROM2Q8N271 AC003685.2-201ENST00000422795 395 ntBASIC4.68□□□□□ -1.66
PROM2Q8N271 AC026271.5-201ENST00000577873 130 ntBASIC4.68□□□□□ -1.66
PROM2Q8N271 MIR3616-201ENST00000584070 92 ntBASIC4.68□□□□□ -1.66
PROM2Q8N271 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC4.68□□□□□ -1.66
PROM2Q8N271 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PROM2Q8N271 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PROM2Q8N271 RNU6-1067P-201ENST00000384752 107 ntBASIC4.67□□□□□ -1.66
PROM2Q8N271 AC090844.1-201ENST00000422019 156 ntBASIC4.67□□□□□ -1.66
PROM2Q8N271 RPS12P2-201ENST00000439728 269 ntBASIC4.67□□□□□ -1.66
PROM2Q8N271 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.67□□□□□ -1.66
PROM2Q8N271 AC025445.1-201ENST00000502728 300 ntBASIC4.67□□□□□ -1.66
PROM2Q8N271 RNU7-12P-201ENST00000516030 62 ntBASIC4.67□□□□□ -1.66
PROM2Q8N271 MIR5680-201ENST00000577577 84 ntBASIC4.67□□□□□ -1.66
PROM2Q8N271 MIR4791-201ENST00000607666 84 ntBASIC4.67□□□□□ -1.66
PROM2Q8N271 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
PROM2Q8N271 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PROM2Q8N271 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.67□□□□□ -1.66
PROM2Q8N271 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PROM2Q8N271 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PROM2Q8N271 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PROM2Q8N271 RNU6-633P-201ENST00000362612 103 ntBASIC4.66□□□□□ -1.66
PROM2Q8N271 RNU6-788P-201ENST00000390967 104 ntBASIC4.66□□□□□ -1.66
PROM2Q8N271 RNU7-2P-201ENST00000516096 62 ntBASIC4.66□□□□□ -1.66
PROM2Q8N271 MIR5004-201ENST00000579078 107 ntBASIC4.66□□□□□ -1.66
PROM2Q8N271 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.66□□□□□ -1.66
PROM2Q8N271 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PROM2Q8N271 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PROM2Q8N271 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.66□□□□□ -1.66
PROM2Q8N271 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PROM2Q8N271 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PROM2Q8N271 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms