Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RNU6-1040P-201ENST00000383974 107 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 Y_RNA.570-201ENST00000384750 101 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 MIR608-201ENST00000384820 100 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 MIR136-201ENST00000385207 82 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 RPS3AP1-201ENST00000413190 320 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 AC138393.2-201ENST00000414742 246 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.69□□□□□ -2.3
ZNF546Q86UE3 RBMX2P4-201ENST00000441256 376 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 HMGN2P32-201ENST00000444648 269 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 U8.19-201ENST00000459095 133 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 HMGN1P7-201ENST00000491722 313 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 RN7SKP295-201ENST00000517264 153 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.69□□□□□ -2.3
ZNF546Q86UE3 AP003716.2-201ENST00000528260 108 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 MIR3124-201ENST00000582636 67 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 AL359821.1-201ENST00000605519 182 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
ZNF546Q86UE3 MIR337-201ENST00000362281 93 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 Y_RNA.387-201ENST00000383918 102 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 MCFD2P1-201ENST00000417812 300 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 AC096644.2-201ENST00000429278 159 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 AC005840.1-201ENST00000498412 377 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 TRMT112P2-201ENST00000512910 132 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 RNU7-41P-201ENST00000515917 61 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 RNA5SP255-201ENST00000516370 107 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 SNORD45.4-201ENST00000516629 73 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 RNU6-699P-201ENST00000517081 110 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
ZNF546Q86UE3 AC006600.1-201ENST00000572529 153 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 MIR4498-201ENST00000577599 66 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 MIR4423-201ENST00000580922 80 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 VN1R91P-201ENST00000594377 169 ntBASIC0.68□□□□□ -2.3
ZNF546Q86UE3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.68□□□□□ -2.3
ZNF546Q86UE3 RNA5SP48-201ENST00000363969 126 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 RNU6-1175P-201ENST00000365200 107 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 MIR520C-201ENST00000385005 87 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 MIR532-201ENST00000385025 91 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 RNU6-131P-201ENST00000391144 107 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 MIR1185-1-201ENST00000408598 86 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 RNU6-855P-201ENST00000410395 104 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 RNU6-710P-201ENST00000410424 105 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 MLLT10P1-201ENST00000418346 262 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 AC005042.3-201ENST00000453230 174 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.67□□□□□ -2.3
ZNF546Q86UE3 RNU6-1053P-201ENST00000515930 101 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.67□□□□□ -2.3
ZNF546Q86UE3 MIR4272-201ENST00000635924 64 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 MIR1302-1-201ENST00000637932 143 ntBASIC0.67□□□□□ -2.3
ZNF546Q86UE3 RNU6-1084P-201ENST00000362498 107 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 RNY1P10-201ENST00000363268 113 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 Y_RNA.142-201ENST00000363491 102 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 SNORD50B-201ENST00000364995 70 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 Y_RNA.390-201ENST00000383932 102 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 SNRPGP10-201ENST00000432323 225 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.66□□□□□ -2.3
ZNF546Q86UE3 RN7SKP164-201ENST00000516138 266 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 RNU7-43P-201ENST00000516554 64 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 SNORA18.7-201ENST00000516910 131 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 Y_RNA.718-201ENST00000517110 102 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 MIR4764-201ENST00000580680 88 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 FAM71BP1-201ENST00000604431 523 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 SEPT14P17-201ENST00000617978 177 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 AL442644.1-201ENST00000454390 3105 ntBASIC0.66□□□□□ -2.3
ZNF546Q86UE3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
ZNF546Q86UE3 SNORA25.3-201ENST00000363205 127 ntBASIC0.65□□□□□ -2.31
ZNF546Q86UE3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.65□□□□□ -2.31
ZNF546Q86UE3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.65□□□□□ -2.31
ZNF546Q86UE3 Y_RNA.463-201ENST00000384271 102 ntBASIC0.65□□□□□ -2.31
ZNF546Q86UE3 AL390729.2-201ENST00000416137 156 ntBASIC0.65□□□□□ -2.31
ZNF546Q86UE3 FABP5P4-201ENST00000437203 171 ntBASIC0.65□□□□□ -2.31
ZNF546Q86UE3 SNORD123-201ENST00000459473 70 ntBASIC0.65□□□□□ -2.31
ZNF546Q86UE3 COX6CP14-201ENST00000469580 174 ntBASIC0.65□□□□□ -2.31
ZNF546Q86UE3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.65□□□□□ -2.31
ZNF546Q86UE3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.65□□□□□ -2.31
ZNF546Q86UE3 AL132765.2-201ENST00000610812 351 ntBASIC0.65□□□□□ -2.31
ZNF546Q86UE3 AC010205.1-201ENST00000616668 449 ntBASIC0.65□□□□□ -2.31
ZNF546Q86UE3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.64□□□□□ -2.31
ZNF546Q86UE3 RNU6-1115P-201ENST00000362490 106 ntBASIC0.64□□□□□ -2.31
ZNF546Q86UE3 RNU6-392P-201ENST00000364926 101 ntBASIC0.64□□□□□ -2.31
ZNF546Q86UE3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.64□□□□□ -2.31
ZNF546Q86UE3 Y_RNA.428-201ENST00000384078 102 ntBASIC0.64□□□□□ -2.31
ZNF546Q86UE3 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
ZNF546Q86UE3 AL590004.1-201ENST00000405321 300 ntBASIC0.64□□□□□ -2.31
ZNF546Q86UE3 RNU7-152P-201ENST00000458982 64 ntBASIC0.64□□□□□ -2.31
ZNF546Q86UE3 RNU7-116P-201ENST00000516940 62 ntBASIC0.64□□□□□ -2.31
ZNF546Q86UE3 AC131055.1-201ENST00000584626 316 ntBASIC0.64□□□□□ -2.31
ZNF546Q86UE3 MIR6857-201ENST00000613267 93 ntBASIC0.64□□□□□ -2.31
ZNF546Q86UE3 MIR6866-201ENST00000638146 69 ntBASIC0.64□□□□□ -2.31
ZNF546Q86UE3 RNA5SP432-201ENST00000362480 116 ntBASIC0.63□□□□□ -2.31
ZNF546Q86UE3 RNU6-1283P-201ENST00000365314 105 ntBASIC0.63□□□□□ -2.31
ZNF546Q86UE3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.63□□□□□ -2.31
ZNF546Q86UE3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.63□□□□□ -2.31
ZNF546Q86UE3 Y_RNA.384-201ENST00000383909 102 ntBASIC0.63□□□□□ -2.31
ZNF546Q86UE3 Y_RNA.456-201ENST00000384232 111 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms