Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.82□□□□□ -2.7
VPS13CQ709C8 AC011373.1-201ENST00000607270 237 ntBASIC-1.82□□□□□ -2.7
VPS13CQ709C8 MIR8066-201ENST00000617280 78 ntBASIC-1.82□□□□□ -2.7
VPS13CQ709C8 RNU6-154P-201ENST00000384306 106 ntBASIC-1.82□□□□□ -2.7
VPS13CQ709C8 AL365338.1-201ENST00000422282 858 ntBASIC-1.82□□□□□ -2.7
VPS13CQ709C8 AC104458.1-201ENST00000608243 463 ntBASIC-1.82□□□□□ -2.7
VPS13CQ709C8 RNU6-987P-201ENST00000384759 104 ntBASIC-1.83□□□□□ -2.7
VPS13CQ709C8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-1.83□□□□□ -2.7
VPS13CQ709C8 AC104629.1-201ENST00000494226 508 ntBASIC-1.83□□□□□ -2.7
VPS13CQ709C8 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.83□□□□□ -2.7
VPS13CQ709C8 AC025647.1-201ENST00000517879 253 ntBASIC-1.83□□□□□ -2.7
VPS13CQ709C8 RNU6-403P-201ENST00000363163 104 ntBASIC-1.83□□□□□ -2.7
VPS13CQ709C8 RPS27AP14-201ENST00000422868 454 ntBASIC-1.83□□□□□ -2.7
VPS13CQ709C8 AC120024.3-201ENST00000603167 156 ntBASIC-1.83□□□□□ -2.7
VPS13CQ709C8 RNU2-51P-201ENST00000410708 197 ntBASIC-1.83□□□□□ -2.7
VPS13CQ709C8 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.83□□□□□ -2.7
VPS13CQ709C8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.83□□□□□ -2.7
VPS13CQ709C8 AC007547.1-201ENST00000462177 490 ntBASIC-1.83□□□□□ -2.7
VPS13CQ709C8 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.83□□□□□ -2.7
VPS13CQ709C8 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 COX7BP2-201ENST00000437976 242 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-1.84□□□□□ -2.7
VPS13CQ709C8 snoU13.2-201ENST00000459201 104 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 SNORD63.1-201ENST00000516178 80 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-1.84□□□□□ -2.7
VPS13CQ709C8 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.84□□□□□ -2.7
VPS13CQ709C8 ELOCP20-201ENST00000422460 345 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 AL358934.1-201ENST00000432346 324 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 Z98949.2-201ENST00000440996 144 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 AC015724.1-201ENST00000478577 156 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 RNU6-143P-201ENST00000516942 93 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 AC245505.1-201ENST00000556398 224 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.84□□□□□ -2.7
VPS13CQ709C8 MIR548AR-201ENST00000582191 57 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 MIR6874-201ENST00000635894 71 ntBASIC-1.84□□□□□ -2.7
VPS13CQ709C8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.84□□□□□ -2.7
VPS13CQ709C8 RNU6-545P-201ENST00000362681 104 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 AC084290.1-201ENST00000434995 374 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.85□□□□□ -2.71
VPS13CQ709C8 AC133104.2-201ENST00000615272 193 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 AC010608.3-201ENST00000625048 527 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 RNA5SP26-201ENST00000362406 119 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 RNU6-878P-201ENST00000384578 110 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.85□□□□□ -2.71
VPS13CQ709C8 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 RNU6-850P-201ENST00000516934 103 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 RNU6-400P-201ENST00000391173 106 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 MIR1283-1-201ENST00000408494 87 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 AC005776.1-201ENST00000603164 290 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 RN7SKP299-201ENST00000606679 301 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 U6.73-201ENST00000619194 103 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 snoZ196.1-201ENST00000625269 89 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 U6.114-201ENST00000636407 96 ntBASIC-1.85□□□□□ -2.71
VPS13CQ709C8 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 MIR7-1-201ENST00000384871 110 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 UQCRBP2-201ENST00000447827 297 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 SNORD98-201ENST00000636377 67 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 RNU4-10P-201ENST00000364383 140 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 RNU6-841P-201ENST00000383872 107 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 MIR5006-201ENST00000583027 110 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 Y_RNA.623-201ENST00000411128 95 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 AC023158.1-201ENST00000561632 1025 ntBASIC-1.86□□□□□ -2.71
VPS13CQ709C8 RNU7-74P-201ENST00000459104 62 ntBASIC-1.87□□□□□ -2.71
VPS13CQ709C8 AL158042.1-201ENST00000605338 460 ntBASIC-1.87□□□□□ -2.71
VPS13CQ709C8 MIR20A-201ENST00000362279 71 ntBASIC-1.87□□□□□ -2.71
VPS13CQ709C8 SNORD28B-201ENST00000390993 75 ntBASIC-1.87□□□□□ -2.71
VPS13CQ709C8 RNU2-8P-201ENST00000410727 190 ntBASIC-1.87□□□□□ -2.71
VPS13CQ709C8 MTND1P33-201ENST00000446251 917 ntBASIC-1.87□□□□□ -2.71
VPS13CQ709C8 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.87□□□□□ -2.71
VPS13CQ709C8 RNU6-54P-201ENST00000365563 107 ntBASIC-1.87□□□□□ -2.71
VPS13CQ709C8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.87□□□□□ -2.71
VPS13CQ709C8 AC009902.1-201ENST00000519351 183 ntBASIC-1.87□□□□□ -2.71
VPS13CQ709C8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.87□□□□□ -2.71
VPS13CQ709C8 MTCYBP2-201ENST00000407745 171 ntBASIC-1.88□□□□□ -2.71
VPS13CQ709C8 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-1.88□□□□□ -2.71
VPS13CQ709C8 RNU6-393P-201ENST00000384475 107 ntBASIC-1.88□□□□□ -2.71
VPS13CQ709C8 SNORD38B-201ENST00000384690 67 ntBASIC-1.88□□□□□ -2.71
VPS13CQ709C8 AC244670.1-201ENST00000436879 112 ntBASIC-1.88□□□□□ -2.71
VPS13CQ709C8 RNU7-161P-201ENST00000517289 62 ntBASIC-1.88□□□□□ -2.71
VPS13CQ709C8 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.88□□□□□ -2.71
VPS13CQ709C8 RNU2-9P-201ENST00000410194 145 ntBASIC-1.88□□□□□ -2.71
VPS13CQ709C8 MIR376A2-201ENST00000636782 80 ntBASIC-1.88□□□□□ -2.71
VPS13CQ709C8 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-1.89□□□□□ -2.71
VPS13CQ709C8 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.89□□□□□ -2.71
VPS13CQ709C8 AC020550.1-201ENST00000447385 163 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 AC068587.5-201ENST00000528506 175 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 MTND1P8-201ENST00000571424 950 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 SNORD115-13-201ENST00000363358 82 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 RNU6-637P-201ENST00000384050 107 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 AC244090.1-201ENST00000441884 93 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 RNU7-99P-201ENST00000516271 62 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 Y_RNA.62-201ENST00000362840 99 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 MIR544A-201ENST00000384855 91 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 AC018880.2-201ENST00000414265 201 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms