Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 S100A11P2-201ENST00000467589 312 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 RN7SKP19-201ENST00000516016 252 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 RNU6-693P-201ENST00000516134 107 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 AL353149.1-201ENST00000610667 244 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 ICE2P2-201ENST00000483823 2787 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 RNU6-888P-201ENST00000363010 101 ntBASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 RNU6-755P-201ENST00000364400 103 ntBASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 RNU6-851P-201ENST00000384565 107 ntBASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 AC063976.4-201ENST00000421971 163 ntBASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 AL021397.1-201ENST00000451806 248 ntBASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 AL049830.1-201ENST00000468034 425 ntBASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 TRBV12-1-201ENST00000479785 344 ntBASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 AC004486.1-201ENST00000546846 233 ntBASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 AC025166.1-201ENST00000612411 163 ntBASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.73□□□□□ -1.97
RNF111Q6ZNA4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 RNU6-1292P-201ENST00000383856 107 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 SNORD24-201ENST00000383884 75 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 RNU6-160P-201ENST00000384591 107 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 MIR548A1-201ENST00000385041 97 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 MIR802-201ENST00000390235 94 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 AC009238.1-201ENST00000442165 424 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 AC009237.6-201ENST00000446969 424 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 Y_RNA.649-201ENST00000459077 103 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 AC003982.1-202ENST00000469928 248 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 AL163195.1-201ENST00000496941 348 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 IGKV1-22-201ENST00000524313 326 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 AL358944.1-201ENST00000528537 144 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
RNF111Q6ZNA4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 RNU6-862P-201ENST00000362804 105 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 SNORD68-201ENST00000363214 84 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 MIR548A2-201ENST00000384956 97 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 MIR522-201ENST00000385071 87 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 MIR1263-201ENST00000408324 86 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 SNRPGP13-201ENST00000442212 177 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 RNU1-131P-201ENST00000458943 161 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 RN7SL636P-201ENST00000497504 294 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 RNA5SP236-201ENST00000516169 116 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 RNU6-1149P-201ENST00000516810 97 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 RN7SKP282-201ENST00000516824 299 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 SNORA31.26-201ENST00000517250 137 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 AP002004.2-201ENST00000531656 154 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 MIR3613-201ENST00000579844 87 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 MIR3670-2-201ENST00000582974 65 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 MIR3616-201ENST00000584070 92 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 MIR3670-1-201ENST00000584160 65 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 MIR3670-3-201ENST00000584855 65 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 MIR3670-4-201ENST00000612260 65 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 AC096644.4-201ENST00000563417 2912 ntBASIC2.71□□□□□ -1.98
RNF111Q6ZNA4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 Y_RNA.346-201ENST00000365385 112 ntBASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 RNU6-147P-201ENST00000383983 107 ntBASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 SNORA44-201ENST00000384584 132 ntBASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 MIR512-1-201ENST00000384913 84 ntBASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 MIRLET7F2-201ENST00000385277 83 ntBASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 SNORD77.3-201ENST00000391113 65 ntBASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 FTH1P12-201ENST00000432137 551 ntBASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 AC087685.1-201ENST00000587507 141 ntBASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 AC010297.1-201ENST00000623948 149 ntBASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 MTND5P18-201ENST00000445624 1801 ntBASIC2.7□□□□□ -1.98
RNF111Q6ZNA4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RNF111Q6ZNA4 MIR518F-201ENST00000384973 87 ntBASIC2.69□□□□□ -1.98
RNF111Q6ZNA4 AL445687.1-201ENST00000439946 251 ntBASIC2.69□□□□□ -1.98
RNF111Q6ZNA4 RNU7-94P-201ENST00000459576 63 ntBASIC2.69□□□□□ -1.98
RNF111Q6ZNA4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.69□□□□□ -1.98
RNF111Q6ZNA4 RNU6-826P-201ENST00000516827 104 ntBASIC2.69□□□□□ -1.98
RNF111Q6ZNA4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.69□□□□□ -1.98
RNF111Q6ZNA4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RNF111Q6ZNA4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.69□□□□□ -1.98
RNF111Q6ZNA4 MAPK10-266ENST00000641066 6555 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 RNU6-1298P-201ENST00000362456 101 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 SNORD115-3-201ENST00000363100 82 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 RNA5SP493-201ENST00000364115 91 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 MIR515-2-201ENST00000384883 83 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 MIR515-1-201ENST00000384884 83 ntBASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RNF111Q6ZNA4 NDUFB4P4-201ENST00000404822 243 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms