Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 RPEP5-201ENST00000441137 268 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 MTND5P20-201ENST00000448677 143 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 AC091951.2-201ENST00000500762 203 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 AC114811.1-201ENST00000507207 168 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 SNORD111.1-201ENST00000516421 86 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 RNU6-875P-201ENST00000516488 106 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 SNORA40.14-201ENST00000516543 86 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 AL121655.1-201ENST00000605811 308 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 AC004832.4-201ENST00000608952 331 ntBASIC1.16□□□□□ -2.22
RPUSD3Q6P087 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.15□□□□□ -2.23
RPUSD3Q6P087 snoU2-30.1-201ENST00000365012 70 ntBASIC1.15□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.336-201ENST00000365307 109 ntBASIC1.15□□□□□ -2.23
RPUSD3Q6P087 MIR136-201ENST00000385207 82 ntBASIC1.15□□□□□ -2.23
RPUSD3Q6P087 RNU6-855P-201ENST00000410395 104 ntBASIC1.15□□□□□ -2.23
RPUSD3Q6P087 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.15□□□□□ -2.23
RPUSD3Q6P087 AL591704.2-201ENST00000421658 181 ntBASIC1.15□□□□□ -2.23
RPUSD3Q6P087 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.15□□□□□ -2.23
RPUSD3Q6P087 RPS20P10-201ENST00000451209 253 ntBASIC1.15□□□□□ -2.23
RPUSD3Q6P087 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.15□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.661-201ENST00000516003 99 ntBASIC1.15□□□□□ -2.23
RPUSD3Q6P087 RNU6-1116P-201ENST00000517269 99 ntBASIC1.15□□□□□ -2.23
RPUSD3Q6P087 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.15□□□□□ -2.23
RPUSD3Q6P087 MIR4661-201ENST00000582720 75 ntBASIC1.15□□□□□ -2.23
RPUSD3Q6P087 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.15□□□□□ -2.23
RPUSD3Q6P087 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
RPUSD3Q6P087 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.252-201ENST00000364556 101 ntBASIC1.14□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.329-201ENST00000365209 107 ntBASIC1.14□□□□□ -2.23
RPUSD3Q6P087 RNY1P14-201ENST00000384426 108 ntBASIC1.14□□□□□ -2.23
RPUSD3Q6P087 MIR200A-201ENST00000384875 90 ntBASIC1.14□□□□□ -2.23
RPUSD3Q6P087 RNU6-131P-201ENST00000391144 107 ntBASIC1.14□□□□□ -2.23
RPUSD3Q6P087 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.14□□□□□ -2.23
RPUSD3Q6P087 MLLT10P1-201ENST00000418346 262 ntBASIC1.14□□□□□ -2.23
RPUSD3Q6P087 UBL5P1-201ENST00000507979 193 ntBASIC1.14□□□□□ -2.23
RPUSD3Q6P087 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.14□□□□□ -2.23
RPUSD3Q6P087 SNORD79.1-201ENST00000516069 84 ntBASIC1.14□□□□□ -2.23
RPUSD3Q6P087 AC092447.9-201ENST00000603395 144 ntBASIC1.14□□□□□ -2.23
RPUSD3Q6P087 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
RPUSD3Q6P087 AL391516.1-201ENST00000554380 2449 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.253-201ENST00000364562 112 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.331-201ENST00000365267 102 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.341-201ENST00000365341 102 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 SNORD114-22-201ENST00000365423 72 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.356-201ENST00000365475 113 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 RNU6-1323P-201ENST00000384025 107 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.456-201ENST00000384232 111 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 MIR526A1-201ENST00000384897 85 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 AL160004.2-201ENST00000432935 350 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 AC015922.2-201ENST00000435593 184 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.13□□□□□ -2.23
RPUSD3Q6P087 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.13□□□□□ -2.23
RPUSD3Q6P087 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.702-201ENST00000516843 96 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 AC136932.1-201ENST00000574771 208 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 MIR4801-201ENST00000582704 82 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 AC011373.1-201ENST00000607270 237 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 AC091925.1-201ENST00000623204 462 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
RPUSD3Q6P087 RNU6-1115P-201ENST00000362490 106 ntBASIC1.12□□□□□ -2.23
RPUSD3Q6P087 SNORD114-24-201ENST00000365029 72 ntBASIC1.12□□□□□ -2.23
RPUSD3Q6P087 RNU6-42P-201ENST00000384165 107 ntBASIC1.12□□□□□ -2.23
RPUSD3Q6P087 MIR489-201ENST00000384923 84 ntBASIC1.12□□□□□ -2.23
RPUSD3Q6P087 MIR522-201ENST00000385071 87 ntBASIC1.12□□□□□ -2.23
RPUSD3Q6P087 MIR1298-201ENST00000408783 112 ntBASIC1.12□□□□□ -2.23
RPUSD3Q6P087 RNA5SP220-201ENST00000516298 104 ntBASIC1.12□□□□□ -2.23
RPUSD3Q6P087 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.12□□□□□ -2.23
RPUSD3Q6P087 MIR4423-201ENST00000580922 80 ntBASIC1.12□□□□□ -2.23
RPUSD3Q6P087 MIR548S-201ENST00000581352 82 ntBASIC1.12□□□□□ -2.23
RPUSD3Q6P087 AL606534.2-204ENST00000635008 178 ntBASIC1.12□□□□□ -2.23
RPUSD3Q6P087 RNU1-93P-201ENST00000364704 169 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 AC117470.1-201ENST00000381974 330 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.439-201ENST00000384119 94 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 RNU6-708P-201ENST00000384217 107 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 MT-TD-201ENST00000387419 68 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 RNU6-1248P-201ENST00000391096 64 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.11□□□□□ -2.23
RPUSD3Q6P087 AC245047.8-201ENST00000456455 284 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 U8.20-201ENST00000459445 131 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 AC093852.1-201ENST00000503587 266 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 RN7SKP179-201ENST00000516126 217 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 SNORD45.4-201ENST00000516629 73 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 RNU7-110P-201ENST00000516891 62 ntBASIC1.11□□□□□ -2.23
RPUSD3Q6P087 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
RPUSD3Q6P087 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
RPUSD3Q6P087 RNU4-50P-201ENST00000364361 141 ntBASIC1.1□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.315-201ENST00000365117 102 ntBASIC1.1□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.529-201ENST00000384586 119 ntBASIC1.1□□□□□ -2.23
RPUSD3Q6P087 RNU6-21P-201ENST00000384710 107 ntBASIC1.1□□□□□ -2.23
RPUSD3Q6P087 SNRPGP10-201ENST00000432323 225 ntBASIC1.1□□□□□ -2.23
RPUSD3Q6P087 AC002429.1-201ENST00000437672 148 ntBASIC1.1□□□□□ -2.23
RPUSD3Q6P087 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.1□□□□□ -2.23
RPUSD3Q6P087 RNU6-1007P-201ENST00000516586 107 ntBASIC1.1□□□□□ -2.23
RPUSD3Q6P087 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.1□□□□□ -2.23
RPUSD3Q6P087 MIR5188-201ENST00000583467 113 ntBASIC1.1□□□□□ -2.23
RPUSD3Q6P087 AC087685.1-201ENST00000587507 141 ntBASIC1.1□□□□□ -2.23
RPUSD3Q6P087 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
RPUSD3Q6P087 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
RPUSD3Q6P087 MIR96-201ENST00000362288 78 ntBASIC1.09□□□□□ -2.23
RPUSD3Q6P087 Y_RNA.242-201ENST00000364473 110 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms