Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF43Q68DV7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RNF43Q68DV7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF43Q68DV7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF43Q68DV7 Y_RNA.344-201ENST00000365381 112 ntBASIC3.14□□□□□ -1.91
RNF43Q68DV7 MIR759-201ENST00000390224 91 ntBASIC3.14□□□□□ -1.91
RNF43Q68DV7 SNRPGP10-201ENST00000432323 225 ntBASIC3.14□□□□□ -1.91
RNF43Q68DV7 HMGN1P7-201ENST00000491722 313 ntBASIC3.14□□□□□ -1.91
RNF43Q68DV7 AC007536.1-201ENST00000533382 349 ntBASIC3.14□□□□□ -1.91
RNF43Q68DV7 AC103810.1-201ENST00000579873 453 ntBASIC3.14□□□□□ -1.91
RNF43Q68DV7 AC090115.4-201ENST00000609970 188 ntBASIC3.14□□□□□ -1.91
RNF43Q68DV7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF43Q68DV7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RNF43Q68DV7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF43Q68DV7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF43Q68DV7 MIR302B-201ENST00000362188 73 ntBASIC3.13□□□□□ -1.91
RNF43Q68DV7 RNA5SP252-201ENST00000391131 119 ntBASIC3.13□□□□□ -1.91
RNF43Q68DV7 RNA5SP38-201ENST00000410750 119 ntBASIC3.13□□□□□ -1.91
RNF43Q68DV7 SNRPGP13-201ENST00000442212 177 ntBASIC3.13□□□□□ -1.91
RNF43Q68DV7 MIR5197-201ENST00000583721 112 ntBASIC3.13□□□□□ -1.91
RNF43Q68DV7 MIR4765-201ENST00000585007 77 ntBASIC3.13□□□□□ -1.91
RNF43Q68DV7 AC008507.4-201ENST00000585464 127 ntBASIC3.13□□□□□ -1.91
RNF43Q68DV7 AC025521.1-201ENST00000621624 286 ntBASIC3.13□□□□□ -1.91
RNF43Q68DV7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF43Q68DV7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RNF43Q68DV7 MIR22-201ENST00000362190 85 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 RNU4-82P-201ENST00000362443 140 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 SNORA63D-201ENST00000364359 132 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 Y_RNA.265-201ENST00000364677 108 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 RNU6-690P-201ENST00000365242 106 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 MIR518F-201ENST00000384973 87 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 SNORD67-201ENST00000390833 111 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 AL139132.1-201ENST00000431587 344 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 HMGN2P18-201ENST00000450680 270 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 RNU2-34P-201ENST00000516534 121 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 RNA5SP367-201ENST00000516557 118 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF43Q68DV7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF43Q68DV7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF43Q68DV7 AC096644.4-201ENST00000563417 2912 ntBASIC3.12□□□□□ -1.91
RNF43Q68DV7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF43Q68DV7 Y_RNA.93-201ENST00000363066 109 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 Y_RNA.253-201ENST00000364562 112 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 MIR520G-201ENST00000385064 90 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 RNA5SP225-201ENST00000410874 135 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 AC233266.1-201ENST00000454518 96 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 RNU6-965P-201ENST00000516721 96 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 SNORA31.21-201ENST00000517180 77 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 SUMO2P16-201ENST00000519475 264 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF43Q68DV7 AC073413.2-201ENST00000604332 360 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 AC242852.1-201ENST00000612151 96 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 AC244015.1-201ENST00000622301 99 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 MIR6733-201ENST00000635723 61 ntBASIC3.11□□□□□ -1.91
RNF43Q68DV7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RNF43Q68DV7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF43Q68DV7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF43Q68DV7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF43Q68DV7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
RNF43Q68DV7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RNF43Q68DV7 Y_RNA.107-201ENST00000363190 121 ntBASIC3.1□□□□□ -1.91
RNF43Q68DV7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RNF43Q68DV7 RNA5SP184-201ENST00000411071 108 ntBASIC3.1□□□□□ -1.91
RNF43Q68DV7 RNA5SP508-201ENST00000411327 119 ntBASIC3.1□□□□□ -1.91
RNF43Q68DV7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.1□□□□□ -1.91
RNF43Q68DV7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF43Q68DV7 MRPS36P2-201ENST00000512569 299 ntBASIC3.1□□□□□ -1.91
RNF43Q68DV7 SNORA31.1-201ENST00000515993 133 ntBASIC3.1□□□□□ -1.91
RNF43Q68DV7 SNORA31.5-201ENST00000516190 133 ntBASIC3.1□□□□□ -1.91
RNF43Q68DV7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.1□□□□□ -1.91
RNF43Q68DV7 MIR4319-201ENST00000577285 85 ntBASIC3.1□□□□□ -1.91
RNF43Q68DV7 AC022217.4-201ENST00000604389 163 ntBASIC3.1□□□□□ -1.91
RNF43Q68DV7 AC021443.1-201ENST00000604478 211 ntBASIC3.1□□□□□ -1.91
RNF43Q68DV7 MIR1248-201ENST00000629190 106 ntBASIC3.1□□□□□ -1.91
RNF43Q68DV7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RNF43Q68DV7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
RNF43Q68DV7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF43Q68DV7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.09□□□□□ -1.91
RNF43Q68DV7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RNF43Q68DV7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RNF43Q68DV7 AC108206.1-201ENST00000570186 4159 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 RNU6-349P-201ENST00000362402 107 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 RNU6-228P-201ENST00000362700 106 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 Y_RNA.298-201ENST00000364960 107 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 SNORA2.2-201ENST00000365473 135 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 RNU6-1104P-201ENST00000384723 104 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 MIR548D2-201ENST00000384955 97 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RNF43Q68DV7 MIR887-201ENST00000401258 79 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 MIR1253-201ENST00000408273 105 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 SNORD88.1-201ENST00000408684 91 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 Y_RNA.593-201ENST00000410292 98 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 RN7SL499P-201ENST00000481141 276 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 RN7SL20P-201ENST00000488827 297 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 RNA5SP112-201ENST00000515937 99 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 RNU6-1291P-201ENST00000516591 104 ntBASIC3.09□□□□□ -1.91
RNF43Q68DV7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 558.4 ms