Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC092881.1-201ENST00000638218 2733 ntBASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 Y_RNA.140-201ENST00000363474 103 ntBASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 RNU6-1163P-201ENST00000364516 107 ntBASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 AL109933.2-201ENST00000452651 260 ntBASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 RNU7-94P-201ENST00000459576 63 ntBASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 MIR3200-201ENST00000580767 85 ntBASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 ZNF861P-201ENST00000588126 639 ntBASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 RNU6-86P-201ENST00000606534 107 ntBASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 U6.108-201ENST00000637764 58 ntBASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNFT1Q5M7Z0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 Y_RNA.171-201ENST00000363760 102 ntBASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 Y_RNA.332-201ENST00000365271 113 ntBASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 RPS12P2-201ENST00000439728 269 ntBASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 AC069257.2-201ENST00000441819 155 ntBASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 MIR1270-201ENST00000459320 83 ntBASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 AC125388.1-201ENST00000459631 156 ntBASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 AL353149.1-201ENST00000610667 244 ntBASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
RNFT1Q5M7Z0 GABRG2-229ENST00000641017 3628 ntBASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-37-201ENST00000363768 82 ntBASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 SNORA80E-201ENST00000384744 137 ntBASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 RNU1-101P-201ENST00000391171 127 ntBASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 Z98742.3-201ENST00000418637 326 ntBASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 AL445685.2-201ENST00000422551 342 ntBASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 AC025518.1-201ENST00000479856 347 ntBASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 RNU1-142P-201ENST00000516682 145 ntBASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 MIR548AE2-201ENST00000583456 67 ntBASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.26□□□□□ -1.89
RNFT1Q5M7Z0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-34-201ENST00000362441 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-12-201ENST00000362583 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-29-201ENST00000362834 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-9-201ENST00000362912 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-21-201ENST00000362963 81 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-14-201ENST00000363090 81 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-41-201ENST00000363608 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-11-201ENST00000363616 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-5-201ENST00000363633 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-39-201ENST00000363694 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 RNA5SP50-201ENST00000363731 107 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-4-201ENST00000363810 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD38.1-201ENST00000363863 68 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-6-201ENST00000363942 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-42-201ENST00000364273 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 Y_RNA.241-201ENST00000364470 117 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-15-201ENST00000364809 81 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-26-201ENST00000365067 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-10-201ENST00000365073 81 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-43-201ENST00000365503 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 SNORD115-36-201ENST00000365629 82 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 RNA5SP467-201ENST00000391274 118 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 RPPH1-2P-201ENST00000516688 293 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 RNU6-965P-201ENST00000516721 96 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 RNU6-1258P-201ENST00000516911 111 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 MIR486-1-201ENST00000612171 68 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 U4.6-201ENST00000621618 127 ntBASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
RNFT1Q5M7Z0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 MIR340-201ENST00000362125 95 ntBASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 RNU6-1244P-201ENST00000363614 108 ntBASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 Y_RNA.247-201ENST00000364500 92 ntBASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 MIR491-201ENST00000384877 84 ntBASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 RNU6-1319P-201ENST00000390855 104 ntBASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 RNU6-747P-201ENST00000390928 104 ntBASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 RNU6-241P-201ENST00000391148 104 ntBASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 RNU6-177P-201ENST00000411257 104 ntBASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 BX510359.1-201ENST00000456973 237 ntBASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 RNA5SP33-201ENST00000516687 98 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms