Protein–RNA interactions for Protein: Q16798

ME3, NADP-dependent malic enzyme, mitochondrial, humanhuman

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME3Q16798 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ME3Q16798 HSPE1P9-201ENST00000440046 311 ntBASIC1.8□□□□□ -2.12
ME3Q16798 RNU7-141P-201ENST00000459304 62 ntBASIC1.8□□□□□ -2.12
ME3Q16798 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.8□□□□□ -2.12
ME3Q16798 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.8□□□□□ -2.12
ME3Q16798 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.8□□□□□ -2.12
ME3Q16798 RNU6-1291P-201ENST00000516591 104 ntBASIC1.8□□□□□ -2.12
ME3Q16798 AC127455.1-201ENST00000565496 145 ntBASIC1.8□□□□□ -2.12
ME3Q16798 DEFB122-202ENST00000569013 197 ntBASIC1.8□□□□□ -2.12
ME3Q16798 MIR4713-201ENST00000582691 75 ntBASIC1.8□□□□□ -2.12
ME3Q16798 MIR8054-201ENST00000620877 86 ntBASIC1.8□□□□□ -2.12
ME3Q16798 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ME3Q16798 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
ME3Q16798 RNU6-899P-201ENST00000363947 107 ntBASIC1.79□□□□□ -2.12
ME3Q16798 RNU6-1048P-201ENST00000364054 107 ntBASIC1.79□□□□□ -2.12
ME3Q16798 Y_RNA.267-201ENST00000364679 109 ntBASIC1.79□□□□□ -2.12
ME3Q16798 Y_RNA.401-201ENST00000383965 117 ntBASIC1.79□□□□□ -2.12
ME3Q16798 Y_RNA.478-201ENST00000384358 107 ntBASIC1.79□□□□□ -2.12
ME3Q16798 RNU6-1289P-201ENST00000384431 106 ntBASIC1.79□□□□□ -2.12
ME3Q16798 AL603910.2-201ENST00000407268 136 ntBASIC1.79□□□□□ -2.12
ME3Q16798 RNU2-14P-201ENST00000411053 191 ntBASIC1.79□□□□□ -2.12
ME3Q16798 BTF3P11-201ENST00000426582 477 ntBASIC1.79□□□□□ -2.12
ME3Q16798 snoU13.27-201ENST00000459278 104 ntBASIC1.79□□□□□ -2.12
ME3Q16798 Y_RNA.637-201ENST00000459424 114 ntBASIC1.79□□□□□ -2.12
ME3Q16798 RNU2-56P-201ENST00000516826 190 ntBASIC1.79□□□□□ -2.12
ME3Q16798 AC024405.2-202ENST00000532731 184 ntBASIC1.79□□□□□ -2.12
ME3Q16798 AC011604.1-201ENST00000545978 196 ntBASIC1.79□□□□□ -2.12
ME3Q16798 POLR3GP1-201ENST00000594073 261 ntBASIC1.79□□□□□ -2.12
ME3Q16798 AL162424.1-201ENST00000602325 221 ntBASIC1.79□□□□□ -2.12
ME3Q16798 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ME3Q16798 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
ME3Q16798 SNORA1B-201ENST00000362535 133 ntBASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.82-201ENST00000363000 102 ntBASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.92-201ENST00000363043 102 ntBASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.235-201ENST00000364412 102 ntBASIC1.78□□□□□ -2.12
ME3Q16798 RNU6-740P-201ENST00000364734 105 ntBASIC1.78□□□□□ -2.12
ME3Q16798 U8.7-201ENST00000364940 136 ntBASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.306-201ENST00000365015 102 ntBASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.312-201ENST00000365089 102 ntBASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.322-201ENST00000365151 102 ntBASIC1.78□□□□□ -2.12
ME3Q16798 SNORA4.2-201ENST00000365313 147 ntBASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.416-201ENST00000384014 113 ntBASIC1.78□□□□□ -2.12
ME3Q16798 RNU6-360P-201ENST00000390944 104 ntBASIC1.78□□□□□ -2.12
ME3Q16798 RN7SKP200-201ENST00000410564 320 ntBASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.618-201ENST00000410949 107 ntBASIC1.78□□□□□ -2.12
ME3Q16798 RPL31P63-201ENST00000422565 375 ntBASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.650-201ENST00000459002 102 ntBASIC1.78□□□□□ -2.12
ME3Q16798 U8.19-201ENST00000459095 133 ntBASIC1.78□□□□□ -2.12
ME3Q16798 RPL23AP42-201ENST00000471152 471 ntBASIC1.78□□□□□ -2.12
ME3Q16798 AC117454.1-201ENST00000491120 168 ntBASIC1.78□□□□□ -2.12
ME3Q16798 SNORA31.10-201ENST00000516482 106 ntBASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.777-201ENST00000516982 102 ntBASIC1.78□□□□□ -2.12
ME3Q16798 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.771-201ENST00000598668 102 ntBASIC1.78□□□□□ -2.12
ME3Q16798 BX248123.2-201ENST00000606318 124 ntBASIC1.78□□□□□ -2.12
ME3Q16798 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.78□□□□□ -2.12
ME3Q16798 AC013791.1-201ENST00000616619 62 ntBASIC1.78□□□□□ -2.12
ME3Q16798 Y_RNA.789-201ENST00000622480 102 ntBASIC1.78□□□□□ -2.12
ME3Q16798 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
ME3Q16798 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
ME3Q16798 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.78□□□□□ -2.12
ME3Q16798 RNU6-661P-201ENST00000362409 107 ntBASIC1.77□□□□□ -2.13
ME3Q16798 Y_RNA.307-201ENST00000365022 117 ntBASIC1.77□□□□□ -2.13
ME3Q16798 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
ME3Q16798 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
ME3Q16798 RNU6-440P-201ENST00000390882 105 ntBASIC1.77□□□□□ -2.13
ME3Q16798 MTCO2P33-201ENST00000402100 465 ntBASIC1.77□□□□□ -2.13
ME3Q16798 MIR1304-201ENST00000408243 91 ntBASIC1.77□□□□□ -2.13
ME3Q16798 COX6CP10-201ENST00000416832 224 ntBASIC1.77□□□□□ -2.13
ME3Q16798 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.77□□□□□ -2.13
ME3Q16798 AC233266.1-201ENST00000454518 96 ntBASIC1.77□□□□□ -2.13
ME3Q16798 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.77□□□□□ -2.13
ME3Q16798 SNORD2.1-201ENST00000458762 69 ntBASIC1.77□□□□□ -2.13
ME3Q16798 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.77□□□□□ -2.13
ME3Q16798 MIR4709-201ENST00000577272 72 ntBASIC1.77□□□□□ -2.13
ME3Q16798 AC005357.1-201ENST00000588399 301 ntBASIC1.77□□□□□ -2.13
ME3Q16798 AP000942.4-201ENST00000604811 241 ntBASIC1.77□□□□□ -2.13
ME3Q16798 SNORA28-201ENST00000606769 126 ntBASIC1.77□□□□□ -2.13
ME3Q16798 BX284668.6-201ENST00000606899 438 ntBASIC1.77□□□□□ -2.13
ME3Q16798 AL008718.3-201ENST00000610217 321 ntBASIC1.77□□□□□ -2.13
ME3Q16798 AC242852.1-201ENST00000612151 96 ntBASIC1.77□□□□□ -2.13
ME3Q16798 AC244015.1-201ENST00000622301 99 ntBASIC1.77□□□□□ -2.13
ME3Q16798 snoU18.1-201ENST00000629629 71 ntBASIC1.77□□□□□ -2.13
ME3Q16798 AC134026.1-201ENST00000623249 2239 ntBASIC1.76□□□□□ -2.13
ME3Q16798 Y_RNA.20-201ENST00000362479 113 ntBASIC1.76□□□□□ -2.13
ME3Q16798 Y_RNA.54-201ENST00000362766 105 ntBASIC1.76□□□□□ -2.13
ME3Q16798 Y_RNA.117-201ENST00000363294 101 ntBASIC1.76□□□□□ -2.13
ME3Q16798 RNA5SP190-201ENST00000365222 118 ntBASIC1.76□□□□□ -2.13
ME3Q16798 Y_RNA.447-201ENST00000384184 113 ntBASIC1.76□□□□□ -2.13
ME3Q16798 FTH1P12-201ENST00000432137 551 ntBASIC1.76□□□□□ -2.13
ME3Q16798 SNORD13-201ENST00000459299 104 ntBASIC1.76□□□□□ -2.13
ME3Q16798 RNU7-34P-201ENST00000459394 64 ntBASIC1.76□□□□□ -2.13
ME3Q16798 snoU13.26-201ENST00000459452 105 ntBASIC1.76□□□□□ -2.13
ME3Q16798 RPL23AP54-201ENST00000495129 419 ntBASIC1.76□□□□□ -2.13
ME3Q16798 MTND1P19-201ENST00000511780 315 ntBASIC1.76□□□□□ -2.13
ME3Q16798 RNU6-1023P-201ENST00000516137 106 ntBASIC1.76□□□□□ -2.13
ME3Q16798 RNU7-28P-201ENST00000516759 62 ntBASIC1.76□□□□□ -2.13
ME3Q16798 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.76□□□□□ -2.13
ME3Q16798 MIR4282-201ENST00000583613 67 ntBASIC1.76□□□□□ -2.13
ME3Q16798 AL929325.1-201ENST00000603096 117 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms