Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 RNU1-96P-201ENST00000364163 162 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 RNU6-969P-201ENST00000383900 105 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 AL355497.1-201ENST00000406262 551 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 MIR1283-2-201ENST00000408621 87 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 AC009310.1-201ENST00000414414 451 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 snoU13.23-201ENST00000458863 104 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 RNU7-120P-201ENST00000459334 63 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 AC091021.1-201ENST00000468051 388 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 RPL23AP42-201ENST00000471152 471 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.37□□□□□ -2.03
ATP2B3Q16720 SCARNA8-201ENST00000515924 131 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 RNU6-1278P-201ENST00000516130 107 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 RNU6-1219P-201ENST00000516143 112 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 RNU6-295P-201ENST00000516901 104 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 AC127455.1-201ENST00000565496 145 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 MIR3935-201ENST00000583472 104 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 AP003357.1-201ENST00000604497 148 ntBASIC2.37□□□□□ -2.03
ATP2B3Q16720 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.37□□□□□ -2.03
ATP2B3Q16720 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ATP2B3Q16720 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ATP2B3Q16720 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
ATP2B3Q16720 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.36□□□□□ -2.03
ATP2B3Q16720 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
ATP2B3Q16720 RNU1-58P-201ENST00000362413 163 ntBASIC2.36□□□□□ -2.03
ATP2B3Q16720 RNU4-17P-201ENST00000365598 141 ntBASIC2.36□□□□□ -2.03
ATP2B3Q16720 MIR583-201ENST00000384846 75 ntBASIC2.36□□□□□ -2.03
ATP2B3Q16720 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.36□□□□□ -2.03
ATP2B3Q16720 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.36□□□□□ -2.03
ATP2B3Q16720 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.36□□□□□ -2.03
ATP2B3Q16720 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.36□□□□□ -2.03
ATP2B3Q16720 RNU6-1146P-201ENST00000516282 102 ntBASIC2.36□□□□□ -2.03
ATP2B3Q16720 RNU6-1291P-201ENST00000516591 104 ntBASIC2.36□□□□□ -2.03
ATP2B3Q16720 MIR4524B-201ENST00000581569 115 ntBASIC2.36□□□□□ -2.03
ATP2B3Q16720 AL353149.1-201ENST00000610667 244 ntBASIC2.36□□□□□ -2.03
ATP2B3Q16720 AC012640.5-201ENST00000623897 319 ntBASIC2.36□□□□□ -2.03
ATP2B3Q16720 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.36□□□□□ -2.03
ATP2B3Q16720 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ATP2B3Q16720 Y_RNA.233-201ENST00000364407 101 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 Y_RNA.270-201ENST00000364693 104 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 RNU6-1323P-201ENST00000384025 107 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 MT-TT-201ENST00000387460 66 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 RNU6-381P-201ENST00000391259 108 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 AL445685.2-201ENST00000422551 342 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 AC003989.2-201ENST00000440224 169 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 AL606517.2-201ENST00000442855 241 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 AC245047.8-201ENST00000456455 284 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 RNA5SP182-201ENST00000516064 82 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 RNU7-193P-201ENST00000516723 65 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 RNU6-1096P-201ENST00000517089 102 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 SNORA31.25-201ENST00000517242 134 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 DEFB122-202ENST00000569013 197 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 AC007229.1-201ENST00000590455 412 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.35□□□□□ -2.03
ATP2B3Q16720 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ATP2B3Q16720 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
ATP2B3Q16720 RNU6-886P-201ENST00000384319 105 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 SNORA8-201ENST00000384574 139 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 SNORA8.3-201ENST00000384679 139 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 Y_RNA.571-201ENST00000384753 98 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 MIR626-201ENST00000385032 94 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 RNA5SP323-201ENST00000391094 133 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 RNU11-3P-201ENST00000391111 133 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 SNORA40.18-201ENST00000391200 128 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 HMGN2P39-201ENST00000398005 273 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 AL163195.1-201ENST00000496941 348 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 RNU7-99P-201ENST00000516271 62 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 RNU1-40P-201ENST00000516816 164 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 RNU1-97P-201ENST00000516872 164 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 AL359075.3-201ENST00000613288 217 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 Y_RNA.802-201ENST00000614892 130 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.34□□□□□ -2.03
ATP2B3Q16720 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.34□□□□□ -2.03
ATP2B3Q16720 AC008555.8-201ENST00000623602 2168 ntBASIC2.34□□□□□ -2.04
ATP2B3Q16720 Y_RNA.267-201ENST00000364679 109 ntBASIC2.33□□□□□ -2.04
ATP2B3Q16720 RNU6-1080P-201ENST00000383982 107 ntBASIC2.33□□□□□ -2.04
ATP2B3Q16720 MIR518A2-201ENST00000384966 87 ntBASIC2.33□□□□□ -2.04
ATP2B3Q16720 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ATP2B3Q16720 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.33□□□□□ -2.04
ATP2B3Q16720 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.33□□□□□ -2.04
ATP2B3Q16720 AC233266.1-201ENST00000454518 96 ntBASIC2.33□□□□□ -2.04
ATP2B3Q16720 AC011604.1-201ENST00000545978 196 ntBASIC2.33□□□□□ -2.04
ATP2B3Q16720 AC015712.3-201ENST00000559380 164 ntBASIC2.33□□□□□ -2.04
ATP2B3Q16720 AC242852.1-201ENST00000612151 96 ntBASIC2.33□□□□□ -2.04
ATP2B3Q16720 AC244015.1-201ENST00000622301 99 ntBASIC2.33□□□□□ -2.04
ATP2B3Q16720 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.33□□□□□ -2.04
ATP2B3Q16720 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATP2B3Q16720 MIR367-201ENST00000362299 68 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 RNA5SP432-201ENST00000362480 116 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 Y_RNA.229-201ENST00000364347 113 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 Y_RNA.238-201ENST00000364441 102 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 Y_RNA.412-201ENST00000384001 104 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 Y_RNA.555-201ENST00000384673 110 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 SNORA26.9-201ENST00000391322 122 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 SUMO2P12-201ENST00000405924 140 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 Y_RNA.621-201ENST00000411065 96 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 CYCSP49-201ENST00000420810 319 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.32□□□□□ -2.04
ATP2B3Q16720 RNU6-437P-201ENST00000459408 95 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 RPS27P21-201ENST00000486977 252 ntBASIC2.32□□□□□ -2.04
ATP2B3Q16720 RPL36AP21-201ENST00000490372 323 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms