Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 BNIP3P40-201ENST00000596017 556 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AC008608.1-201ENST00000603910 127 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU4-1-201ENST00000363925 141 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU6-880P-201ENST00000384526 107 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU6-883P-201ENST00000384597 107 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU6-607P-201ENST00000411283 108 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 MTCO3P8-201ENST00000453691 755 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU2-11P-201ENST00000459191 187 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 MTCO2P6-201ENST00000463134 685 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU6-150P-201ENST00000516237 95 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU6-706P-201ENST00000517229 104 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.45□□□□□ -2.48
HSPG2P98160 MIR6851-201ENST00000617060 67 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU6-403P-201ENST00000363163 104 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 SNORD115-42-201ENST00000364273 82 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 SNORA24-201ENST00000384096 131 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 SNORA36A-201ENST00000384221 132 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 RNU6-784P-201ENST00000384330 106 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 MIR9-2-201ENST00000384838 87 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 MIR570-201ENST00000384917 97 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 U8.15-201ENST00000390947 134 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.45□□□□□ -2.48
HSPG2P98160 AC073464.1-201ENST00000429823 534 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
HSPG2P98160 GMFBP1-201ENST00000467831 427 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 MTCO3P38-201ENST00000468910 766 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AC140658.3-201ENST00000567603 271 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 MIR4752-201ENST00000579672 72 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 MIR4280-201ENST00000582178 76 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 AC006435.5-201ENST00000624486 112 ntBASIC-0.45□□□□□ -2.48
HSPG2P98160 SNORD24-201ENST00000383884 75 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 MIR516B1-201ENST00000385211 90 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 RNU4-55P-201ENST00000410731 137 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 AC090844.1-201ENST00000422019 156 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 AC114878.1-201ENST00000441166 358 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.46□□□□□ -2.48
HSPG2P98160 RNU7-138P-201ENST00000459479 64 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 HIF1AP1-201ENST00000553642 175 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 RNU6-88P-201ENST00000606801 100 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 MIR124-2-201ENST00000385081 109 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 U8.17-201ENST00000391292 132 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 MTCO2P3-201ENST00000442543 421 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 snoU13.16-201ENST00000459350 104 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 AC134698.4-201ENST00000523451 826 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.46□□□□□ -2.48
HSPG2P98160 SNORD114-29-201ENST00000364819 70 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 SNORA24.1-201ENST00000384401 135 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 MIR522-201ENST00000385071 87 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.46□□□□□ -2.48
HSPG2P98160 EPS15P1-201ENST00000448836 336 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 MTND1P12-201ENST00000455231 147 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 MTCO2P29-201ENST00000465212 189 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.46□□□□□ -2.48
HSPG2P98160 MTND4LP25-201ENST00000570218 163 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.46□□□□□ -2.48
HSPG2P98160 POLR3GP1-201ENST00000594073 261 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 AL158050.2-201ENST00000605336 568 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 RNU1-29P-201ENST00000606574 126 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 AC137590.2-201ENST00000619709 240 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 AC019226.2-201ENST00000625973 424 ntBASIC-0.46□□□□□ -2.48
HSPG2P98160 RNU6-428P-201ENST00000362942 107 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 RNU6-827P-201ENST00000365553 106 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 RNU6-692P-201ENST00000384496 107 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 RNU6-131P-201ENST00000391144 107 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 MTATP6P17-201ENST00000431030 672 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 RNU6-329P-201ENST00000459618 107 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 MTND1P5-201ENST00000517906 940 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 MIR3118-1-201ENST00000581787 76 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 AL356055.1-201ENST00000602528 446 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 AP001330.5-201ENST00000607176 411 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 RNU6-792P-201ENST00000363490 107 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 RNU6-324P-201ENST00000363957 106 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 RNU6-61P-201ENST00000365528 109 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 RNU6-769P-201ENST00000384407 104 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 MTATP6P18-201ENST00000417994 673 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 AL137792.2-201ENST00000443484 235 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.47□□□□□ -2.48
HSPG2P98160 U8.19-201ENST00000459095 133 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 U8.22-201ENST00000459141 133 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.47□□□□□ -2.48
HSPG2P98160 RNU6-765P-201ENST00000516916 99 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 RNU6-685P-201ENST00000517088 95 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 MIR4789-201ENST00000577469 82 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 MIR6507-201ENST00000613630 70 ntBASIC-0.47□□□□□ -2.48
HSPG2P98160 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.47□□□□□ -2.48
HSPG2P98160 RNU1-141P-201ENST00000364623 158 ntBASIC-0.47□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms