Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MIR1262-201ENST00000408276 93 ntBASIC3.65□□□□□ -1.83
USP46P62068 STAG3L5P-204ENST00000443759 179 ntBASIC3.65□□□□□ -1.83
USP46P62068 AC109327.2-201ENST00000448339 378 ntBASIC3.65□□□□□ -1.83
USP46P62068 RPL23AP67-201ENST00000465341 474 ntBASIC3.65□□□□□ -1.83
USP46P62068 RN7SL594P-201ENST00000470590 287 ntBASIC3.65□□□□□ -1.83
USP46P62068 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.65□□□□□ -1.83
USP46P62068 AL161756.2-201ENST00000604597 246 ntBASIC3.65□□□□□ -1.83
USP46P62068 U6.98-201ENST00000637157 84 ntBASIC3.65□□□□□ -1.83
USP46P62068 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
USP46P62068 RNU6-1099P-201ENST00000363533 107 ntBASIC3.64□□□□□ -1.83
USP46P62068 SNORA27-201ENST00000384323 126 ntBASIC3.64□□□□□ -1.83
USP46P62068 RNU6-1152P-201ENST00000384576 107 ntBASIC3.64□□□□□ -1.83
USP46P62068 SNORD78.1-201ENST00000390866 65 ntBASIC3.64□□□□□ -1.83
USP46P62068 RNA5SP109-201ENST00000391010 116 ntBASIC3.64□□□□□ -1.83
USP46P62068 Y_RNA.601-201ENST00000410500 113 ntBASIC3.64□□□□□ -1.83
USP46P62068 AL022718.1-201ENST00000412004 84 ntBASIC3.64□□□□□ -1.83
USP46P62068 AC003685.2-201ENST00000422795 395 ntBASIC3.64□□□□□ -1.83
USP46P62068 RNA5SP57-201ENST00000459463 123 ntBASIC3.64□□□□□ -1.83
USP46P62068 RNU7-61P-201ENST00000515897 61 ntBASIC3.64□□□□□ -1.83
USP46P62068 Y_RNA.685-201ENST00000516532 108 ntBASIC3.64□□□□□ -1.83
USP46P62068 RNU7-28P-201ENST00000516759 62 ntBASIC3.64□□□□□ -1.83
USP46P62068 RNU6-1116P-201ENST00000517269 99 ntBASIC3.64□□□□□ -1.83
USP46P62068 AC087741.2-201ENST00000619415 172 ntBASIC3.64□□□□□ -1.83
USP46P62068 AC093010.3-201ENST00000570269 15214 ntBASIC3.64□□□□□ -1.83
USP46P62068 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP46P62068 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.64□□□□□ -1.83
USP46P62068 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
USP46P62068 AC096644.4-201ENST00000563417 2912 ntBASIC3.63□□□□□ -1.83
USP46P62068 Y_RNA.10-201ENST00000362371 110 ntBASIC3.63□□□□□ -1.83
USP46P62068 Y_RNA.219-201ENST00000364232 113 ntBASIC3.63□□□□□ -1.83
USP46P62068 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP46P62068 Y_RNA.466-201ENST00000384294 113 ntBASIC3.63□□□□□ -1.83
USP46P62068 RNA5SP144-201ENST00000410846 116 ntBASIC3.63□□□□□ -1.83
USP46P62068 AL512326.2-201ENST00000426359 151 ntBASIC3.63□□□□□ -1.83
USP46P62068 TRIAP1P1-201ENST00000427062 225 ntBASIC3.63□□□□□ -1.83
USP46P62068 AC006989.1-201ENST00000427212 131 ntBASIC3.63□□□□□ -1.83
USP46P62068 AL049873.1-201ENST00000480540 376 ntBASIC3.63□□□□□ -1.83
USP46P62068 MIR203B-201ENST00000636080 86 ntBASIC3.63□□□□□ -1.83
USP46P62068 MIR1255B1-201ENST00000636325 63 ntBASIC3.63□□□□□ -1.83
USP46P62068 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
USP46P62068 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.63□□□□□ -1.83
USP46P62068 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
USP46P62068 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
USP46P62068 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.62□□□□□ -1.83
USP46P62068 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.62□□□□□ -1.83
USP46P62068 RNA5SP493-201ENST00000364115 91 ntBASIC3.62□□□□□ -1.83
USP46P62068 SNORA25.6-201ENST00000364121 118 ntBASIC3.62□□□□□ -1.83
USP46P62068 Y_RNA.290-201ENST00000364879 114 ntBASIC3.62□□□□□ -1.83
USP46P62068 Y_RNA.593-201ENST00000410292 98 ntBASIC3.62□□□□□ -1.83
USP46P62068 RNU2-27P-201ENST00000516185 142 ntBASIC3.62□□□□□ -1.83
USP46P62068 RNU6-795P-201ENST00000516323 103 ntBASIC3.62□□□□□ -1.83
USP46P62068 AC026333.2-201ENST00000542164 106 ntBASIC3.62□□□□□ -1.83
USP46P62068 MIR3618-201ENST00000580330 88 ntBASIC3.62□□□□□ -1.83
USP46P62068 MIR8058-201ENST00000615737 89 ntBASIC3.62□□□□□ -1.83
USP46P62068 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.62□□□□□ -1.83
USP46P62068 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.62□□□□□ -1.83
USP46P62068 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.62□□□□□ -1.83
USP46P62068 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USP46P62068 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP46P62068 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP46P62068 Y_RNA.17-201ENST00000362433 111 ntBASIC3.61□□□□□ -1.83
USP46P62068 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.61□□□□□ -1.83
USP46P62068 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.61□□□□□ -1.83
USP46P62068 AC005326.1-201ENST00000429197 123 ntBASIC3.61□□□□□ -1.83
USP46P62068 BX510359.1-201ENST00000456973 237 ntBASIC3.61□□□□□ -1.83
USP46P62068 RNU6-162P-201ENST00000516228 103 ntBASIC3.61□□□□□ -1.83
USP46P62068 AC004812.1-201ENST00000540773 146 ntBASIC3.61□□□□□ -1.83
USP46P62068 XIST_intron.1-201ENST00000619444 68 ntBASIC3.61□□□□□ -1.83
USP46P62068 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.61□□□□□ -1.83
USP46P62068 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP46P62068 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP46P62068 AL356274.2-201ENST00000624379 3752 ntBASIC3.61□□□□□ -1.83
USP46P62068 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP46P62068 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP46P62068 PWAR6-201ENST00000552334 4618 ntBASIC3.6□□□□□ -1.83
USP46P62068 RNU6-23P-201ENST00000363283 107 ntBASIC3.6□□□□□ -1.83
USP46P62068 SNORA4.2-201ENST00000365313 147 ntBASIC3.6□□□□□ -1.83
USP46P62068 SNORA9-201ENST00000384215 133 ntBASIC3.6□□□□□ -1.83
USP46P62068 RNU6-733P-201ENST00000410759 104 ntBASIC3.6□□□□□ -1.83
USP46P62068 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.6□□□□□ -1.83
USP46P62068 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.6□□□□□ -1.83
USP46P62068 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.6□□□□□ -1.83
USP46P62068 RPS23P4-201ENST00000487908 423 ntBASIC3.6□□□□□ -1.83
USP46P62068 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.6□□□□□ -1.83
USP46P62068 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP46P62068 AC090821.2-201ENST00000523552 176 ntBASIC3.6□□□□□ -1.83
USP46P62068 Y_RNA.773-201ENST00000607168 90 ntBASIC3.6□□□□□ -1.83
USP46P62068 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.6□□□□□ -1.83
USP46P62068 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP46P62068 AC091152.2-201ENST00000591628 2569 ntBASIC3.59□□□□□ -1.83
USP46P62068 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
USP46P62068 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
USP46P62068 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.59□□□□□ -1.83
USP46P62068 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.59□□□□□ -1.83
USP46P62068 RNU6-661P-201ENST00000362409 107 ntBASIC3.59□□□□□ -1.83
USP46P62068 SNORD115-3-201ENST00000363100 82 ntBASIC3.59□□□□□ -1.83
USP46P62068 RNU6-409P-201ENST00000384114 104 ntBASIC3.59□□□□□ -1.83
USP46P62068 RNU6-424P-201ENST00000384367 105 ntBASIC3.59□□□□□ -1.83
USP46P62068 RNU6-644P-201ENST00000391155 98 ntBASIC3.59□□□□□ -1.83
USP46P62068 RNA5SP120-201ENST00000410900 112 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms